Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2076 ATGGACAATAGTACTATCCCCTTGGCTTACAGAGAGAACCTCCCTGCTTCTCCTGATTGGCTGAACAAAGGAGATAATGGATGGCAGATGACAGCAGCCACACTAGTGGGAATTCAAAGCATGCCAGGTCTTGTGATTCTATATGCAAGCATGGTCAAGAAGAAATGGGCTGTAAATTCAGCTTTCATGGCTCTCTATGCTTTTGCTGCTGTACTCATCTGTTGGGTCCTTGTTTGTTTCAGAATGGCCTTTGGTGATCAACTCCTTCCCTTTTGGGGTAAAGGTGCCCCTGCTTTAGGCCAAAAATTCCTCTTAAAACAAGCCCATGTCCCTGAAACTGCTCAATACTCCAAAAATGGGACTTTAGAATCCCCAGGAGTAGAGCCATTTTTCCCCATGGCTTCACTTGTTTACTTCCAATTCACTTTTGCTGCCATCACCATGATATTACTAGCTGGTTCTGTTCTTGGTCGCATGAATATCAAGGCCTGGATGGCTTTTGTCCCTCTCTGGCTCATTTTCTCATACACAGTAGGTGCATTCAGTTTATGGGGTGGTGGCTTCCTCTACCAGTGGGGCGTCATTGATTACTCCGGCGGCTACGTCATCCACCTCTCCTCCGGAATCGCCGGCTTCACCGCCGCTTACTGGGTGGGGCCGAGGCTGAAGAGTGATAGGGAGAGATTTCCTCCTAACAATGTGTTACTAATGCTTGCCGGAGCTGGACTTTTATGGATGGGGTGGTCGGGATTTAACGGGGGAGCACCGTATGCGGCGAGCATTGACGCGTCAATGGCACTGTTGAACACAAACATATGTGCTGCCACCAGCCTTTTGGTGTGGACTTCACTTGACGTCGTCTTCTTTGGTAAGCCATCGGTGATCGGAGCCGTTCAGGGTATGATGACCGGACTTGCCTGCGTCACCCCCGGAGCAGGGCTGGTGCAATCGTGGGCAGCAATGGTGATGGGAATCCTCTCAGGCAGCATACCATGGTTCACTATGATGATCCTTCACAAGAAATCTTCTCTCCTTCAACAGGTAGATGATGCCTTGGGAGTATTTCACACACATGCAGTGGCTGGTCTTTTGGGTGGCCTCCTAACAGGTCTATTGGCGGAGCCACAGCTTTGCCGGTTGATATTGCCGGCGACCACCGACGCAAGGGGCGCATTCTACGGTGGCAACGGCGGCATTCAGTTCTTGAAGCAAATAGTGGCAGCCCTTTTTGTAATTGGATGGAACTTAGTGTCCACATCTATCATTCTTCTTTTCATTCGTCTTTTTATACCGTTGAGGATGCCGGACGAGCAGCTCGAGATCGGCGATGACGCCGTCCACGGTGAGGAGGCTTACGCTCTTTGGGGCGACGGTGAGAGATATGAGCCTAACAAGCATGGCTCCTCAGACAATAACCATGCTTCTTCTGTCTCACCTTATGTCACTGGTGCAAGAGGTGTCACCATAAATTTATAA 1476 0.4986 MDNSTIPLAYRENLPASPDWLNKGDNGWQMTAATLVGIQSMPGLVILYASMVKKKWAVNSAFMALYAFAAVLICWVLVCFRMAFGDQLLPFWGKGAPALGQKFLLKQAHVPETAQYSKNGTLESPGVEPFFPMASLVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASIDASMALLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLACVTPGAGLVQSWAAMVMGILSGSIPWFTMMILHKKSSLLQQVDDALGVFHTHAVAGLLGGLLTGLLAEPQLCRLILPATTDARGAFYGGNGGIQFLKQIVAALFVIGWNLVSTSIILLFIRLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGERYEPNKHGSSDNNHASSVSPYVTGARGVTINL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2076 491 Pfam Ammonium Transporter Family 28 452 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mibi04g2076 491 SUPERFAMILY Ammonium transporter 20 434 - -
Mibi04g2076 491 Gene3D Ammonium transporter AmtB like domains 7 455 IPR029020 -
Mibi04g2076 491 FunFam Ammonium transporter 9 455 - -
Mibi04g2076 491 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mibi04g2076 491 PANTHER AMMONIUM TRANSPORTER MEP2 14 463 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi04g2076 491 PRINTS Rhesus blood group protein signature 321 339 IPR002229 GO:0005886
Mibi04g2076 491 PRINTS Rhesus blood group protein signature 140 156 IPR002229 GO:0005886
Mibi04g2076 491 PRINTS Rhesus blood group protein signature 266 288 IPR002229 GO:0005886
Mibi04g2076 491 PRINTS Rhesus blood group protein signature 359 375 IPR002229 GO:0005886
Mibi04g2076 491 PRINTS Rhesus blood group protein signature 235 253 IPR002229 GO:0005886
Mibi04g2076 491 TIGRFAM amt: ammonium transporter 25 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2076 Mibi-ChrMibi04 52217135 52221349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2076 133 491 Inorganic Solute Cotransporters AT2G38290 75.000 0.0 536