Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2074 ATGTTCCAACATCACACATTCTTCCCCCTATATAAACCCTCCTTCCGACTCCAATTCCCAATCAAGTCCAAATCCAACTTCTCTCCCCAAATACATTTTCTCATACACATGGAGAACAACCTTCCTCCTCCTTCTGACAACCTTGCCTCGTCAACAATATTGTCATCTTCGAAGTCTAAGAAAAAGAGTGGGAAGAAAAACAAAGGAGCAGTGAAACTTTCCACTGATCCACAAAGCGTGGCAGCTAGAGAACGAAGGCATAGAATCAGCGACAGGTTCAAGATCTTACAGAGTATGGTACCTGGTGGGAGTAAATTGGACACAGTTTCAATGTTGGAGGAAGCAATTCATTACGTGAAGTTTTTAAAAACTCAGATATGGCTTCACCAAACCATGATTAACTCTGTTGATCATGACTACCTTCCTTTTCCCAACCATGATGAACAGTTCACTTCTCTTCAACAAAACCTATCTTCTTCTTCTTCTTCTTCTTTGGGTTCTGAGCAGAATTTATCACAGATTCCTCTGGAACAGTATTGTTGCTTCCAGAATGAAGTTGCAACAACAACGTTGGACACCAATATGAACCATTGGCCAGCTTAG 603 0.4129 MFQHHTFFPLYKPSFRLQFPIKSKSNFSPQIHFLIHMENNLPPPSDNLASSTILSSSKSKKKSGKKNKGAVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKLDTVSMLEEAIHYVKFLKTQIWLHQTMINSVDHDYLPFPNHDEQFTSLQQNLSSSSSSSLGSEQNLSQIPLEQYCCFQNEVATTTLDTNMNHWPA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2074 200 CDD bHLH_AtIND_like 74 133 - -
Mibi04g2074 200 Gene3D - 74 131 IPR036638 GO:0046983
Mibi04g2074 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 136 IPR036638 GO:0046983
Mibi04g2074 200 FunFam Transcription factor LAX PANICLE 76 139 - -
Mibi04g2074 200 MobiDBLite consensus disorder prediction 46 84 - -
Mibi04g2074 200 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 52 170 IPR045843 GO:0003700|GO:0006355
Mibi04g2074 200 Pfam Helix-loop-helix DNA-binding domain 83 122 IPR011598 GO:0046983
Mibi04g2074 200 SMART finulus 79 128 IPR011598 GO:0046983
Mibi04g2074 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2074 Mibi-ChrMibi04 52201367 52201969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2074 46 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 51.807 1.68e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g2074 HLH 2e-08 No_clan