Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2069 ATGGACGTCGACGAAACTTCTAAACCCAAAGAGGAAAAGCTCTTATTGGTCATGTTAGTGGGAGCACCTGGAAGCGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGTTCTTCTTCTCGTCCTTGGGTTCGTGTTTGCCAGGATATCATTAAAAATGGAAAGGCAGGAAATAAAGCTCAGTGTCTAAGCAGTGCTGCTGGAGCATTGAAGGATGGAAAGAATGTATTTATTGACAGGTGCAATCTTGATAGAGAACAACGTTCAGGATTCGGAGAGCTTGGTGGACCCCAAATAGATGTACATGCCGTTGTGCTTGATCTTCCTGCGAAGCTTTGTATTTCTCGATCTGTCAAACGATCTGGGCATGAAGGAAATTTGCAGGGAGGAAAAGCAGCTGCAGTGGTGAATAGAATGCTTCAGAAGAAAGAGCTGCCTACATTAAGTGAAGGGTTTAACCGGATCACATTTTGTCATACTGAGAGTGATGTCAAAGTGGCTATTGACACATACAGTGCACTTGGGCCATTGGACAACCTTCCACATGGCTGTTTTGGCCAGAAAAGTAAAGAAGCCAAAGTTCAAGTGGATATAATGAAGTTCTTCAAAAAGGCTGAGGTCCCAGTTGTTGCTGAGTCTCAAGAGAATTGCGGCGGAAATTTTACTTCTCAAAGTGATGAGATGATAGATCCCTGCCAAAAAGATATGGAAAATATTTCATCAAATTCAGATAAAGCCAACTTAGAGACAGTAAATGTAGAAAATATCTCAAAAGGTTCCACTGTTTCTCATGATGATCACCGTTTCACAGGTGATATACCCACCTTGGCATTTCCATCTATTTCAACAGCTGATTTCCAATTTGACCATGAGAAGGCAGCTGATATTATTGTGGAGAAAGTTGCAGAGTTCTCAAATAAGCTTCCCAATGTTAGATTTGTTTTAGTTGACTTGACTCATGGTTCGAAGATCCTGTCTTTAGTTAAAGCCAAAGCTGCTAAGAAAAACTTAGACCCCGGAAAGTTTTTTACCCATGTTGGGGACATTACTTGCCTTAAGTCCACAGGAGGCTTGCACTGTGCTGTGATAGCTAATGCTGCCAACTGGCGATTGAAACCTGGAGGTGGAGGAGTTAATGCTGCAATCTTCAAGGCTGCGGGTCCTGTCTTGGAGTCTGCAACCAAAGAACGAGCACAATTGCTTGTGCCTGGGAACGCTGTTACTGTCCCTCTGCCATCATCTTCTCCTTTGTTTGCTAGAGAGGGAGTAACCCATGTAATTCATGTTCTTGGACCAAATATGAATCCACAAAGGCCAGATTGTCTCAATAATGATTACAATAAAGGCTGCAAGATTCTCAGAGAGGCTTACACTTCACTATTTGAAGCTTTTGCTTCCATTGTGAGGACTGGGACAGAGCAAAAGATCAAGAGAGATGCTGATCATGGACCTGAAAAAAGTAAGAAATGCAAGGGAAGTCAGGATGATGTTGAACAGATCTGTAGTGGTACCAAGGTTGTAAACAAAGATTCAGGTAATAAAAAAAGTGATGGCAGCTTGAATAAAACATGGGGATCATGGGCTCAAGCTCTTCATCAAATAGCCATGCATCCTGAGAAGCACAAGGATGAATTGCTTGAAATATCCGACGAACTGGTTGTGCTGAATGATCTGTATCCTAAGGCACAGAAGCATATTTTGGTGTTGACCCGAACTAGAGGCCTTGATTGCCTGGCTAATGTTCAAAATGACCACCTTCACCTACTAAAGAGGATGCATGATGTGGGTCTAAAGTGGGCTGAGAAATTCTTGCATGAGAATGCCTCATTAGTTTTTCGTCTTGGCTATCACTCGGCTCCATCAATGAGACAACTTCATTTACATGTTATAAGCCAGGACTTCAACTCAAAGCATTTGAAGAACAAGAAGCACTGGAACTCATTCAACACTGATTTCTTTCGTGACTCAGTAGATGTACTTGAGGAGGTCTCTAATAATGGGAAGGCAACCTTGAGAGATGATGAGAAGTTGCTGTCCATGGAGTTGAGGTGCCATAGATGTAGAAGTGCACACCCTAACATTCCCAGGTTAAAATCTCATATTAGCAGTTGCCAAGCTTCATTTCCTTCTTCCTTGCTTCAAAATGGTCGTTTGGTTCGTGCACAAGGTGAAGTTAACATCAGTTCATAA 2187 0.4239 MDVDETSKPKEEKLLLVMLVGAPGSGKSTFCEEVMRSSSRPWVRVCQDIIKNGKAGNKAQCLSSAAGALKDGKNVFIDRCNLDREQRSGFGELGGPQIDVHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQKKELPTLSEGFNRITFCHTESDVKVAIDTYSALGPLDNLPHGCFGQKSKEAKVQVDIMKFFKKAEVPVVAESQENCGGNFTSQSDEMIDPCQKDMENISSNSDKANLETVNVENISKGSTVSHDDHRFTGDIPTLAFPSISTADFQFDHEKAADIIVEKVAEFSNKLPNVRFVLVDLTHGSKILSLVKAKAAKKNLDPGKFFTHVGDITCLKSTGGLHCAVIANAANWRLKPGGGGVNAAIFKAAGPVLESATKERAQLLVPGNAVTVPLPSSSPLFAREGVTHVIHVLGPNMNPQRPDCLNNDYNKGCKILREAYTSLFEAFASIVRTGTEQKIKRDADHGPEKSKKCKGSQDDVEQICSGTKVVNKDSGNKKSDGSLNKTWGSWAQALHQIAMHPEKHKDELLEISDELVVLNDLYPKAQKHILVLTRTRGLDCLANVQNDHLHLLKRMHDVGLKWAEKFLHENASLVFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTDFFRDSVDVLEEVSNNGKATLRDDEKLLSMELRCHRCRSAHPNIPRLKSHISSCQASFPSSLLQNGRLVRAQGEVNISS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2069 728 PANTHER APRATAXIN-RELATED 275 703 - -
Mibi04g2069 728 SMART YBR022w_8 340 479 IPR002589 -
Mibi04g2069 728 Gene3D - 525 707 IPR036265 -
Mibi04g2069 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 160 IPR027417 -
Mibi04g2069 728 MobiDBLite consensus disorder prediction 474 493 - -
Mibi04g2069 728 FunFam Transcription factor bHLH140 4 172 - -
Mibi04g2069 728 FunFam aprataxin isoform X2 524 704 - -
Mibi04g2069 728 Pfam C2HE / C2H2 / C2HC zinc-binding finger 648 701 IPR032566 -
Mibi04g2069 728 SUPERFAMILY Macro domain-like 331 461 IPR043472 -
Mibi04g2069 728 SUPERFAMILY Macro domain-like 271 317 IPR043472 -
Mibi04g2069 728 FunFam Transcription factor bHLH140 321 468 - -
Mibi04g2069 728 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Mibi04g2069 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 236 322 IPR043472 -
Mibi04g2069 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 323 467 IPR043472 -
Mibi04g2069 728 ProSiteProfiles Macro domain profile. 328 534 IPR002589 -
Mibi04g2069 728 SUPERFAMILY HIT-like 521 687 IPR036265 -
Mibi04g2069 728 Pfam Macro domain 363 438 IPR002589 -
Mibi04g2069 728 Pfam AAA domain 16 141 - -
Mibi04g2069 728 Pfam Scavenger mRNA decapping enzyme C-term binding 531 643 - -
Mibi04g2069 728 Gene3D - 2 170 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2069 5 718 C2H2 Transcription Factor Family AT5G01310 60.411 0.0 871