Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2057 ATGAAGACTCAGCATTTATGTTTATGGATCATCTTTATGATTTTTACAGGTTCTATTGCAAGATTGGAAGCCAAAACCATCGATCCTTACAAGGTCCTTGGTGTTGATAAAAATGCAAGTCAACGGGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTCCAGTATCACCCAGACAAGAACAAAAGCAAGGGTGCACAGGAGAAGTTTTCTCAAATCAACAATGCATACGAGATTTTGTCTGATGAACAGAAAAGGAAGAACTATGACCTGTACGGTGATGAGACCGGCAATCCTGGATTTGGAGCTGAGCATCCTGGAGATCAAGGTGGAAATACTTATTTCACTGGGGGTGGACCAGGGCAAAGTCAGTTTAATTTCAGACCAGGACAATGGCAGGATATGGGTGGGCAGGGAGGTTCTCAGTCGTTCTCCTTTTCCTTCGGCAGGTCTGGTAGTCCTAATTCTTTTGGATTTGGTTTGGAAGATCTTTTTGGTAGTTTTTTCGGTGGTGGTGGACGACGTCGTGGTGGGAGTCAGTTTGGTGGTTTTGGCAGTTCAACTGGTTCTCAATCTGGATTCAAGAGGTCCCCAAAAAGTTTAAGAGCCATAAATTCACAAATCTTCAAGAAAGAAATAGTTGATCAAGGCATGACCTGGATTTTGTTATCATACACACCCTCATCAAAGGGGCTCCAACACTTTGAATCCACTATAGAGGAGGTCGCTAGTTCACTGCAAGGGGCTATAAAGGTCGGAAGTATTGATTGTGGAAAGGAGGCCTCTTTCTGTCAGCAGCTTGGTGCATATCCCCAAAGAGTTCCAAGGGTTTTTGTTTATTCTTTTAAAGGAAATGAAAAGGGTTCTTTCGTAGAATACAGCGGTGACTTGGTTGCTAAGAATTTAAAGGCTTTCTGTCAAGACCACCTACCAAGGTTTTCTAAGCGGATTGACTGGAATTCTCTTGATGAATCTATAGCTTCTGGAAAGTTGCCTGGGGTGATGCTGCTATCTACTAAAAAAGATACTCCAGTAATTTGGCGTGTTCTTAGTGGCCTGTATCGCAAGCGCTTTGCTTTCAGTGATGTCCAGGTTCATGATGTTTCTGATCCGAGATTGAAGAAGCTTGGAGTTGATGCGCTGCCGGCTATAGTAGGTTGGCTACCTAATGGAGAGAAGCAGATTCTGAGAACAGGGATTTCCGTAAAAGATATAAAATCTGCAGTTCATGATCTTGGTAATATACTTGATAGCTTTGAAAAAGTTAGCGAAAAGGCAGCATCGAATGAGGCCAAAAAATCACCCTCTGATACGGATGAGAGGCAGATACGATTCCTTTCTCGATCAAACTTTGATGTTCTTTGTGGTGAGAGAACTCCAGTCTGCATAATTGGTGTATTTAGGTCCTCTAAAGCCAGAGAAAAGCTGCAAGCAATCCTGTCTTCGGTCTCTCAGAAATCTTTCTTAAGGCGATCAAATCAAGCATCAGGCTCTAAGGACTCCATTTCCTATGCTCTTTTGGAAGCTACGAAGCAACCTTCTTTTCTCAAAGCATTTGATAAAAATGGGTTTAAGTCATCAGATGTGTTCTTGATTGCCTACAAACCTAAAAGAAGGAAGTTCACTTCATTTCTGGGTGAAATGACAACAGAGGAAGTAGAGAATTTTATTAGTTCAGTTCTAAATGGAGATATACCGTTCAGGGAAACAAGAGAGAAGCCTGTACTTAAGTAG 1731 0.4206 MKTQHLCLWIIFMIFTGSIARLEAKTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKSKGAQEKFSQINNAYEILSDEQKRKNYDLYGDETGNPGFGAEHPGDQGGNTYFTGGGPGQSQFNFRPGQWQDMGGQGGSQSFSFSFGRSGSPNSFGFGLEDLFGSFFGGGGRRRGGSQFGGFGSSTGSQSGFKRSPKSLRAINSQIFKKEIVDQGMTWILLSYTPSSKGLQHFESTIEEVASSLQGAIKVGSIDCGKEASFCQQLGAYPQRVPRVFVYSFKGNEKGSFVEYSGDLVAKNLKAFCQDHLPRFSKRIDWNSLDESIASGKLPGVMLLSTKKDTPVIWRVLSGLYRKRFAFSDVQVHDVSDPRLKKLGVDALPAIVGWLPNGEKQILRTGISVKDIKSAVHDLGNILDSFEKVSEKAASNEAKKSPSDTDERQIRFLSRSNFDVLCGERTPVCIIGVFRSSKAREKLQAILSSVSQKSFLRRSNQASGSKDSISYALLEATKQPSFLKAFDKNGFKSSDVFLIAYKPKRRKFTSFLGEMTTEEVENFISSVLNGDIPFRETREKPVLK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2057 576 CDD DnaJ 28 81 IPR001623 -
Mibi04g2057 576 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Mibi04g2057 576 ProSiteProfiles dnaJ domain profile. 28 92 IPR001623 -
Mibi04g2057 576 SUPERFAMILY Thioredoxin-like 442 565 IPR036249 -
Mibi04g2057 576 SMART dnaj_3 27 84 IPR001623 -
Mibi04g2057 576 Pfam Thioredoxin-like domain 210 307 - -
Mibi04g2057 576 PANTHER DNAJ PROTEIN ERDJ3A 9 576 - -
Mibi04g2057 576 SUPERFAMILY Chaperone J-domain 19 96 IPR036869 -
Mibi04g2057 576 Gene3D Glutaredoxin 197 317 - -
Mibi04g2057 576 SUPERFAMILY Thioredoxin-like 203 310 IPR036249 -
Mibi04g2057 576 Gene3D DnaJ domain 17 99 IPR036869 -
Mibi04g2057 576 Pfam DnaJ domain 28 89 IPR001623 -
Mibi04g2057 576 PRINTS DnaJ domain signature 84 103 IPR001623 -
Mibi04g2057 576 PRINTS DnaJ domain signature 30 48 IPR001623 -
Mibi04g2057 576 PRINTS DnaJ domain signature 48 63 IPR001623 -
Mibi04g2057 576 PRINTS DnaJ domain signature 64 84 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2057 Mibi-ChrMibi04 52017301 52022897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2057 30 91 C2H2 Transcription Factor Family AT1G74250 41.176 7.81e-07 50.1