Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2026 ATGGCTTCCAATCGCTCTTCCTCTGATGCCTCAGCAAGGGAACGCCTTCGTTGGACTCAACAACTTCATGATCTCTTTGTTGAAGCTGTCAACAGACTTGGTGGCCCTGATAGAGCAACACCAAAGAGTATAGTGAAGGAGATGATTAGTATGGGAGTCTCTGGAATTACCATTTATCACGTCAAAAGCCATTTGCAGAAATACAGGATCAACAAGTTGATTCCAGAGTCTGCTACCAGAAGCAAGCTTGAGAGAAGAAGCATATCTGACATACTGCCTAATTTCAGCACATTAACCACTTTGCAGCTAAAGGAAGCTCTACACTTGCAAATGGAGGTCCAAAGACGTTTGAGTGACCAATTAGAGGTTCAAAGGAACTTGAAGCTAAAAATGGAAGCTCAAGGGAAGTACTTGGAGAGACTAGGCCAAACATATCAAAATTCAACTATCTCCACAAAAATTGCTGGAAATAATAAGCTTCATCGTAATAGTAATAATTCTTCAATGTCTTGTCTTTCTGAGGAATCCGATGATCAACCTAAACATCCTTATGATTCTAGACACAACAGATCATCCAACGTTGTCACTCACAAAAAGCAAAGAGTTGTTCAAGATGATGATATTATTAGGATTAATTTCCCAACAAGTTTGGAGCTTTCTTCTTCTTCATCATCATCATCATCACCGACTCCAGAATTTTGCAACCAAAATTGGGACCTACTTCCTTGGAATCAGCTTGCAGCTTCATTTCCATCATGTGAATCATCTTTGGTTCCAAGCTTCTTGTTGTGA 792 0.4003 MASNRSSSDASARERLRWTQQLHDLFVEAVNRLGGPDRATPKSIVKEMISMGVSGITIYHVKSHLQKYRINKLIPESATRSKLERRSISDILPNFSTLTTLQLKEALHLQMEVQRRLSDQLEVQRNLKLKMEAQGKYLERLGQTYQNSTISTKIAGNNKLHRNSNNSSMSCLSEESDDQPKHPYDSRHNRSSNVVTHKKQRVVQDDDIIRINFPTSLELSSSSSSSSSPTPEFCNQNWDLLPWNQLAASFPSCESSLVPSFLL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2026 263 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 71 IPR006447 GO:0003677
Mibi04g2026 263 MobiDBLite consensus disorder prediction 156 174 - -
Mibi04g2026 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Mibi04g2026 263 FunFam Two-component response regulator 9 73 - -
Mibi04g2026 263 Pfam MYB-CC type transfactor, LHEQLE motif 102 141 IPR025756 -
Mibi04g2026 263 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 231 IPR044848 GO:0003700
Mibi04g2026 263 MobiDBLite consensus disorder prediction 175 192 - -
Mibi04g2026 263 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Mibi04g2026 263 MobiDBLite consensus disorder prediction 156 197 - -
Mibi04g2026 263 Gene3D - 12 73 - -
Mibi04g2026 263 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2026 Mibi-ChrMibi04 51316377 51318999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2026 7 155 G2-like Transcription Factor Family AT4G28610 48.387 4.09e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi04g2026 Myb_DNA-binding 2.7e-06 CL0123