Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2016 ATGGCGTCTTCTTACGAAGAAGCATTGCTGATGGAGAACGGAAACCTCAAGGAATCCACCGGGAAGAACACAATGATGAGGCGCCGTTCAGCTCGCAAAATGTCATCCCAATCATTGCGCACGAGTCCTGGCATCAGACTCTTCTCCAAAGTTCCTTGTTCTCTCCTAAGGAATCTCTTGGCTAATCTCCAAGAGGTCATTCTTGGCACCAAGCTTTCTGTTCTCTTCCCTGCCATTCCTCTCGCCATTGCCGCTCAATGCTATGGATTCGCACGACCGTGGATTTTTGCTTTGAGCTTACTAGGACTGACACCACTGGCTGAACGAATCAGCTTCCTGACAGAACAAATTGCTTACTACACAGGCCCCACAGTGGGAGGGCTTCTGAATGCAACATGTGGGAATGCGACAGAGCTGATAATAGCAATATTTGCTCTAAGCGACAACAAAATAGCAGTGGTCAAGTATTCTCTCTTGGGTTCCATCCTTTCAAACCTTCTCTTAGTCCTTGGAACCTCTCTTTTCTGTGGTGGCATAGCCAACATTTCACGTCCACAAAAATATGACAGAAGACAAGCAGATGTGAACTCACTCATGCTTCTGCTGGCATTATTGTGTCACATGCTTCCAATGCTATTCAGATATGCTTCTCCCTCAACTGCTCTCGCTGCAGACCCATCTCTCCAATTATCAAGAGCTTCAAGTGTTGTCATGTTGATTGCATATTTTGCTTACCTTGTCTTTCAACTCTGGACACATCGCCAATTATTTGAAGCCCAGGATGAAGACTATAATGACAGCGTTTCAGAAGAAGCAGTGATAGGATTCTGGAGTGGGTTTTCCTGGCTGGTAGGGATGACAGTGTTCATAGCATTGTTGTCTGAGTATGTGGTGCAGACAATAGAGGATGCATCAGAGTCATGGGGTTTGTCTGTCAGCTTCCTCAGCATAATTTTACTACCAATAGTAGGAAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTTAAGAACAATCTGGACATCTCTTTGGGTGTTGCTTTGGGCTCTGCAACTCAAATTAGCTTGTTTGTGGTTCCCTTATGTGTGATTGTTTCTTGGATAATGGGCAACAAAATGGATCTCAACTTCAACCCCATTGAAACTGGTTCACTTGCTTTGGCCATTATAGCCACAGCCTTCACTTTACAGGATGGCACAGAACACCATTCAACCAAGCTCAACCAGGCAACATGGTGCCTCAATCAGCAGCCGATGCAGTTTTCAAAGCTTAATTGTGGGTCTTGGTCTCTTTGGATGGCCTCCTTGAGGATGAGAGATGAAGGGAAGCAGAATCCAAACTGA 1347 0.4529 MASSYEEALLMENGNLKESTGKNTMMRRRSARKMSSQSLRTSPGIRLFSKVPCSLLRNLLANLQEVILGTKLSVLFPAIPLAIAAQCYGFARPWIFALSLLGLTPLAERISFLTEQIAYYTGPTVGGLLNATCGNATELIIAIFALSDNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANISRPQKYDRRQADVNSLMLLLALLCHMLPMLFRYASPSTALAADPSLQLSRASSVVMLIAYFAYLVFQLWTHRQLFEAQDEDYNDSVSEEAVIGFWSGFSWLVGMTVFIALLSEYVVQTIEDASESWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNNLDISLGVALGSATQISLFVVPLCVIVSWIMGNKMDLNFNPIETGSLALAIIATAFTLQDGTEHHSTKLNQATWCLNQQPMQFSKLNCGSWSLWMASLRMRDEGKQNPN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2016 448 Pfam Sodium/calcium exchanger protein 280 399 IPR004837 GO:0016020|GO:0055085
Mibi04g2016 448 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016020|GO:0055085
Mibi04g2016 448 TIGRFAM cax: calcium/proton exchanger 77 402 IPR004798 GO:0006816|GO:0015369
Mibi04g2016 448 TIGRFAM caca2: calcium/proton exchanger 58 403 - -
Mibi04g2016 448 FunFam Vacuolar cation/proton exchanger 123 267 - -
Mibi04g2016 448 Gene3D - 123 270 IPR044880 -
Mibi04g2016 448 Gene3D - 271 415 IPR044880 -
Mibi04g2016 448 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 31 403 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2016 Mibi-ChrMibi04 51199629 51205129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2016 12 408 Antiporters AT2G38170 68.642 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0206 11 3107798 3111949 Mibi04g2016 04 51199629 51205129 CCT