Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2012 ATGGGACTGGAGCACTTGAGCGTGAAGGATACAAAGGGCAAGATCATTACTTGCAGAGCGGCGGTGGCTCATGGGGCTGGGGAGAAGTTAGTGATAGAGGAAGTGAGAGTGGAGCCACCACAGAAGAAAGAGGTCAGAATCAAGATCCTCTTCACTTCTGTCTGCCATACTGATCTCTCCGCCTGGCTCGGCCACAATGAAGCTCAAAGGGCTTATCCTAGGATTCTTGGCCATGAAGCCTGCGGGATTGTGGAGAGTGTAGGGGAAGGAGTAAAGGATGTGAAGGAAGGAGACTATGTGGTTCCCTTATTCAACGGTGAGTGTGGTCATTGCAACTTGTGCATGTCTCCCCACACCAATATGTGCCAACACTTTGGGGTCAACCCCATGAAGAAGGTCATGGTGGCTGACGGTGCCACCCGGTTCACCACCGTCCATGGCTGCAAACCCATCTACCATTTCCTCAATACCTCCACCTTCTCCGAGTACACTGTCATTGACTCAGCTTGTGTCGTCAAACTCACTGGCCTCGCCAATCAACATAGCCTCAAAAAGCTCACATTACTCAGCTGTGGAGTTTCTACAGGGGTAGGAGCAGCATGGAACACGGCCAATGTTCAATCTCATTCCACTGTTGCGGTCTTTGGTTTGGGAGCTGTCGGCCTCGCTGTAGCAGAAGGTGCGAGAGCAAGAGGTGCATCCAAAATAATAGGCATAGACATCAACCCTGACAAATTCATCAAAGCCCGGCAAATGGGAGTGACGGATTTCATAAATCCCAGGGATGAGGAGAAGCCTGTATACGAGAGAATAAGAGAAATGACTGGAGGAGGAGGAGTAGACTTTAGCTTTGAATGTGTAGGCAACTCTGATGTCCTCCGAAATGCCTTCTTGTCTGTTCATGAGGGATGGGGATTGACAGTGATATTGGGAATTCATGCAACACCAGAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAATTGTTGCTTCTGTGTTTGGAGGCTTCAAAGGAAGGAGCCAAATCCCTCTTTTTGCCAAACAATGCTTGCAAGGAGTGGTGAAGCTGGACGAGTTCATTACTCACGAGCTTCCCTTTGATGAGATCAACAAAGCCTTTGATCTTTTGGTCTCTGGAAAGTCACTGAGATGTCTCCTACACATAACAAGACAGGAGTGGTATACAGTTCTTCATGCTATCAAAATTTCTTCACAGATCATAGACAGTCTGAAGTATCCCGCAGAGAGAACTTCTGGATTTCTCCCTACAAAATTGGCAGCAGAGCTGGGAGTTCAGGAATTAAAAATTCCCCACGACAGAGGAATGATGATACAAAAGCAATATGTTTAG 1362 0.4765 MGLEHLSVKDTKGKIITCRAAVAHGAGEKLVIEEVRVEPPQKKEVRIKILFTSVCHTDLSAWLGHNEAQRAYPRILGHEACGIVESVGEGVKDVKEGDYVVPLFNGECGHCNLCMSPHTNMCQHFGVNPMKKVMVADGATRFTTVHGCKPIYHFLNTSTFSEYTVIDSACVVKLTGLANQHSLKKLTLLSCGVSTGVGAAWNTANVQSHSTVAVFGLGAVGLAVAEGARARGASKIIGIDINPDKFIKARQMGVTDFINPRDEEKPVYERIREMTGGGGVDFSFECVGNSDVLRNAFLSVHEGWGLTVILGIHATPEMLPIHPMELFDGRRIVASVFGGFKGRSQIPLFAKQCLQGVVKLDEFITHELPFDEINKAFDLLVSGKSLRCLLHITRQEWYTVLHAIKISSQIIDSLKYPAERTSGFLPTKLAAELGVQELKIPHDRGMMIQKQYV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2012 453 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Mibi04g2012 453 Gene3D - 196 335 - -
Mibi04g2012 453 SUPERFAMILY GroES-like 341 391 IPR011032 -
Mibi04g2012 453 Gene3D - 21 387 - -
Mibi04g2012 453 SMART PKS_ER_names_mod 25 386 IPR020843 GO:0016491
Mibi04g2012 453 FunFam S-(hydroxymethyl)glutathione dehydrogenase 196 335 - -
Mibi04g2012 453 Pfam Alcohol dehydrogenase GroES-like domain 43 141 IPR013154 -
Mibi04g2012 453 PANTHER ALCOHOL DEHYDROGENASE 13 389 - -
Mibi04g2012 453 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 183 356 IPR036291 -
Mibi04g2012 453 FunFam Alcohol dehydrogenase 6 21 211 - -
Mibi04g2012 453 SUPERFAMILY GroES-like 11 215 IPR011032 -
Mibi04g2012 453 Pfam Zinc-binding dehydrogenase 219 339 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2012 Mibi-ChrMibi04 51175353 51182659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2012 42 381 Monolignol Biosynthesis Gene Families AT2G21890 27.198 2.98e-12 66.2