Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2011 ATGCGCAAGTCTTTCAAAGATTCCCTCAAAGCTCTTGAAGCTGATATCCAGTTCGCCAATACTCTAGCTTCTGATTATCCAAGAGATTATGATGGTGCCTGCATCCAAATGAGATTGTCCTACAGTCCAGCAGCTCAATTTTTTCTTTTTCTGGTTCAGTGGACTGATTGTAACCTTGCTGGAGCCTTGGGATTGCTTAGAATTCTTATATACAAGGCCTACGAGGATGGTAAGACAACAATGTCTATTTATGAAAGAAAAGCTAGTCTGAAGGATTTCTATTGTGTGATCTTTCCCTCTTTACTGCAACTCCACAGAGGAATTAATGATGTAGAAGACAGAAAACAAAAGGAAATATGTGCTACTAAGTATAAGTCAAAGCCTGTAGTCAGCAAAGGAAAGCATTCTGAAATTGAATTAGAGAGAGAGGAAGAATGCGGTATTTGCATGGAGGTGGGCAGCAAGATTGTATTGCCGAACTGCAGTCACTCAATGTGCATGAAATGCTTTCGAGATTGGCGTGCACGATCTCAGTCTTGCCCTTTCTGCCGGGACAGTTTGAAAAGAGTGAATTCTAGTGACCTTTGGGTATACATGAACAACAATGAGATAGATGACGTGGCCTCAATTACAAGGGAGAATTTGAAGAGATTATTCATGTACATTGAAAAGTTGCCTCTTCTTGTTCTAGATCCAATATTCATGGCTCCGCCTGTCCGCTGGTGA 726 0.4118 MRKSFKDSLKALEADIQFANTLASDYPRDYDGACIQMRLSYSPAAQFFLFLVQWTDCNLAGALGLLRILIYKAYEDGKTTMSIYERKASLKDFYCVIFPSLLQLHRGINDVEDRKQKEICATKYKSKPVVSKGKHSEIELEREEECGICMEVGSKIVLPNCSHSMCMKCFRDWRARSQSCPFCRDSLKRVNSSDLWVYMNNNEIDDVASITRENLKRLFMYIEKLPLLVLDPIFMAPPVRW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2011 241 SUPERFAMILY RING/U-box 137 189 - -
Mibi04g2011 241 SMART ring_2 146 183 IPR001841 -
Mibi04g2011 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Mibi04g2011 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 211 IPR013083 -
Mibi04g2011 241 FunFam RING/U-box superfamily protein 127 193 - -
Mibi04g2011 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
Mibi04g2011 241 PANTHER RING FINGER PROTEIN 41, 151 3 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2011 Mibi-ChrMibi04 51149750 51152465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2011 94 188 C3H Transcription Factor Family AT5G01960 30.000 2.21e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0202 11 3064411 3067564 Mibi04g2011 04 51149750 51152465 CCT