Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2010 ATGCAGTCAATGGCTAGGATTTCTCTAAATGCACATTGTCCCTTTCGTCTCTCCAAAGCATTGAGTCACCCTTGGGCTCCTCTTCCTTCTTCATCTTTTCTGAGAACTCCAGCAATGAAGGGTGCCAAAGGGAAGGGGGCAGTAAGGAGCTCTAAGGAATCATTGAAGCCTGTTGATGACAGAAAGGTTGGAAAGCGAAAGGCTGCAGTTAAACCTGACAAAAGTAATAAACGGCAGGCCAAGGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCCTTCTTTGTATTCCTTGAGGAGTTCAGAACAACTTTTAAGAAAGAAAATCCTAATGTGAAGGCAGTATCAGCTGTTGGCAAAGCTGGAGGAGAGAAATGGAAATCCATGTCTGGGGCTGAGAAAGCTCCATATGAAGCAAAGGCTGCGAAAAGGAAAGCTGAGTATGAAAAACTTATGAATGCTTATAATACAAAGCAGGCAAGCACAGCGGATGACGGAGGTGATGAATCAGACAGGTCCAAATCTGAAGTTAATGATGAAGATGAAGAGGAGGCACACCAAGAAGAGGATGATGATGATGATGACGACGACGACGATGAGGAGGATGACGACTGA 621 0.4509 MQSMARISLNAHCPFRLSKALSHPWAPLPSSSFLRTPAMKGAKGKGAVRSSKESLKPVDDRKVGKRKAAVKPDKSNKRQAKAKKDPNKPKRPPSAFFVFLEEFRTTFKKENPNVKAVSAVGKAGGEKWKSMSGAEKAPYEAKAAKRKAEYEKLMNAYNTKQASTADDGGDESDRSKSEVNDEDEEEAHQEEDDDDDDDDDDEEDDD 206
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2010 206 MobiDBLite consensus disorder prediction 139 153 - -
Mibi04g2010 206 SUPERFAMILY HMG-box 74 158 IPR036910 -
Mibi04g2010 206 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 39 192 IPR031061 -
Mibi04g2010 206 MobiDBLite consensus disorder prediction 121 206 - -
Mibi04g2010 206 MobiDBLite consensus disorder prediction 23 93 - -
Mibi04g2010 206 Pfam HMG (high mobility group) box 89 158 IPR009071 -
Mibi04g2010 206 MobiDBLite consensus disorder prediction 46 90 - -
Mibi04g2010 206 CDD HMGB-UBF_HMG-box 89 154 - -
Mibi04g2010 206 Gene3D High mobility group box domain 72 173 IPR036910 -
Mibi04g2010 206 SMART hmgende2 88 159 IPR009071 -
Mibi04g2010 206 MobiDBLite consensus disorder prediction 177 206 - -
Mibi04g2010 206 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 89 158 IPR009071 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi04g2010 Mibi-ChrMibi04 51143661 51147312 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mibi04g2010 HMG_box 1.5e-23 CL0114