Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2007 ATGGAATTTGAGAGGCTAAGCAGAATGTTTCTGCTCCAATTTTATCATCTTGCTCCCATTGACTTCTTCAAATCAGGGAGTTGAAGCTTTGTGTGGAGTTTTACAAAGAAATTTATCACATTTGGGCTCATTACTGTCACAGTGACAGATCGTTATGTTAGCATTGTTCCGGTTCGTGGTGGCTCTATGTCTCCCACATTTAATCCTAAAACCAGCCCTTCAATGGGAAATATATCTGATGACTATGTCTTGGTTGAGAAATTTTGCCTTGGAAAGTATAGGTTTTCCCGCGGTGATGTGGTGGTATTCAGCTCCCCCTTGAATCACAAGGAGACACACATAAAGAGAATTGTTGCATTACCTGGTGAGTGGTTTGGTGCACAACGTAACTATGATGTACTGAAGATTCCAGAAGGACATTGTTGGGTTGAGGGAGATAATGCAGCTTCCAGCCTGGATTCAAACTCATTTGGTCCTATTCCTTTGGGTTTAGTTCGAGGAAGGGTGACCCACATTGTATGGCCTCCCCAAAGAATAGGTGCGGTAAAGAAGATCTCACCAGAAGGATTTTCTTCGTAA 579 0.4249 MEFERLSRMFLLQFYHLAPIDFFKSGSXSFVWSFTKKFITFGLITVTVTDRYVSIVPVRGGSMSPTFNPKTSPSMGNISDDYVLVEKFCLGKYRFSRGDVVVFSSPLNHKETHIKRIVALPGEWFGAQRNYDVLKIPEGHCWVEGDNAASSLDSNSFGPIPLGLVRGRVTHIVWPPQRIGAVKKISPEGFSS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2007 192 CDD S26_SPase_I 54 169 IPR019533 GO:0004252|GO:0006465
Mibi04g2007 192 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 27 188 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Mibi04g2007 192 FunFam Mitochondrial inner membrane protease subunit 49 187 - -
Mibi04g2007 192 SUPERFAMILY LexA/Signal peptidase 54 182 IPR036286 -
Mibi04g2007 192 Pfam Signal peptidase, peptidase S26 34 123 IPR019533 GO:0004252|GO:0006465
Mibi04g2007 192 Pfam Signal peptidase, peptidase S26 133 174 IPR019533 GO:0004252|GO:0006465
Mibi04g2007 192 Gene3D Umud Fragment, subunit A 49 185 - -
Mibi04g2007 192 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 125 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mibi04g2007 192 PRINTS Bacterial leader peptidase 1 (S26A) family signature 136 155 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mibi04g2007 192 PRINTS Bacterial leader peptidase 1 (S26A) family signature 51 67 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2007 63 182 MADS-box Gene Family AT1G29960 36.508 3.50e-18 75.1