Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2005 ATGATGATGAAGATGAAGAAGAAGGAGAAGGAGAGAGATGATGAGCTTGTTCTGTTCCTGGAGATGCAAAGAAGGGAGAAGGAGAACGAACTCAAAACCTTTCTTCTCCTTCCAAACTCCGAATACGACGTCCTTCATGCTTCTCATTTCGAATTCAGATTAGATGCTATTTCTTCTCTGTTACCTTCAGAAAATGACATGTCTGATTATGACTGGCTTCTTACTCCACCAGGTACACCTCTTTTCCCTGCTTTGGAGAAGGAATCGCAGATTTCAGCTAAGGTTGAAACAGAGATTTCTAAAGATCGAAGAACAGCTTTAAAGCCTAGGGAGACTAATATCATAACAGAACCAGCTTCAAGAAAAATCATAGCCTCAAAGACTCATAAAGTGATGCCTAATCTTAGTTCTTCCACTAATGGTAATGCTAATAGGAGACCTTCATCACCATCCCCTTCCAGATGTTCAACTTTGTCTTCAAGAACCAAATTCTCTAAGGCATTAACCTTAGCTTCTGTGAAGTCAGTAAAATCATCCACTCCTACAAGATCGGCATCTGCATCGAAAATACACCCTGCACATGCGAAAAACTCGACAAAATCACAAGGTTCTTTGCTTGATGCTCCTCCAAAATTGAAGGCTTCATTGCCTAAAAGAGCAGCCTCAGCCTCTAGGTGCAGTAGATTATCTTCTCTTGAGGCTAAAGATAATAATAGCAGTGGAAGACCAAGAAGGCCAATCTTGAGGAGTAGATCTTGTTCAATTAATGGTGGTGAAAATGATAGCCCAGGTATGATTGGGACAAAAATGGTCGAGAGAATAGTGAACATGAGGAAACTGGCACCACCAAAGCTTAATGCAGGCCATCATTCTGCACTTCATAATTCTTCTAGCAAGTCTGATAGCTCAATATTTGGAAGATCACTCTCCAAGAAGTCACTAGATATGGCAATGAGACATATGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGTGCGGGCTTGGTGAGCGATGAAGTTCAACACTTAGATTTTGATTTATTCTTTGCGTCCAGAGATCCATCTACGACCATCATTCCAAGACTTATCAAGGGAAGTATATGTTCTCATATTCAAAAGAGTACATCTATGGAATTTAGAGCAATGATTGGAAATTGCTTCGGTGTCTTGAATTGGTGTAAACCCAAACGGGGGAATTTTTCTGATGATCAGTCACGCGAACAAGTGATATCAACCAGAAGATTCAGTTATAGTTCTTTGAGATCAGCAACAGGAGACTTTCATCCATCCAAGAGAATTGGTCGAGGAGGTTATGGAGTTGTCTACAAGGGAGTTTTACGGGATGGAACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGGGTAAGAGAATTTATGACAGAAATTGATATGATATCAAATATTAGACATCCAAACCTTGTGCAACTAGTCGGCTGCTGTATAGAGGACAACCATCGCATATTGGTCTACGAATTTCTGGAAAACAATAGCCTTGCAAGCTCTTTGCTCGTTTCCAAAAGTAAATGTATTGCTCTAGATTGGCCAAAAAGGGCTTCTATTTGCCATGGTACTGCTTCTGCTCTTGCGTTTCTTCATGATGAGGTTCAGCCAAATATTGTTCACAGAGATATAAAGGCTAGCAACATACTACTTGATGGAAACTTCAATCCCAAAATTGGAGACTTTGGCCTTGCAAAACTTTTTCCCGACAATGTCACCCATCTGAGTACTCGAGTGGCAGGAACTGTAGGATATCTTGCGCCAGAATATGCACTTCTAGGACAGCTAACAAAAAAGGCAGATGTGTACAGTTTTGGTGTTCTCATGCTCGAAGTAATAAGTGGTAGAAGTAGCAGCAAGGCTGCGTTTGGAGATAAGCTACTGGTTCTTGTGGAATGGACCTGGAAGCTGAAAGAAGAAGGTAGGCTTCTGGACATTGTTGATCCAGAACTAACTTCATATGATGAGACTGAGGTCATGCGTTTCATTAAGGTGGCTCTGTTCTGTACCCAAGCAGCTGTTCATCACAGGCCTACCATGAAGCAAGTTGTAGAAATGCTGTCCAAGGAAGTTCATCTTAATGACATGGCTGTGACGGAGCCTGGAGTTCATAGGTGGCATCGCGCCTCCAGTATTGCTGTAAACTTTTCGGATGAGACATCGACTTCTCAGGCAAACAAGTCCAAAAGACCTGATAATTCACACATGACCTCTAACCAGTTTGGTGATTCTGATATTGTGACAGACATGCTTCCAAGATGA 2301 0.4142 MMMKMKKKEKERDDELVLFLEMQRREKENELKTFLLLPNSEYDVLHASHFEFRLDAISSLLPSENDMSDYDWLLTPPGTPLFPALEKESQISAKVETEISKDRRTALKPRETNIITEPASRKIIASKTHKVMPNLSSSTNGNANRRPSSPSPSRCSTLSSRTKFSKALTLASVKSVKSSTPTRSASASKIHPAHAKNSTKSQGSLLDAPPKLKASLPKRAASASRCSRLSSLEAKDNNSSGRPRRPILRSRSCSINGGENDSPGMIGTKMVERIVNMRKLAPPKLNAGHHSALHNSSSKSDSSIFGRSLSKKSLDMAMRHMKEEEEEEEEEEEDGAGLVSDEVQHLDFDLFFASRDPSTTIIPRLIKGSICSHIQKSTSMEFRAMIGNCFGVLNWCKPKRGNFSDDQSREQVISTRRFSYSSLRSATGDFHPSKRIGRGGYGVVYKGVLRDGTQVAIKSLSVESKQGVREFMTEIDMISNIRHPNLVQLVGCCIEDNHRILVYEFLENNSLASSLLVSKSKCIALDWPKRASICHGTASALAFLHDEVQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHLSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGRSSSKAAFGDKLLVLVEWTWKLKEEGRLLDIVDPELTSYDETEVMRFIKVALFCTQAAVHHRPTMKQVVEMLSKEVHLNDMAVTEPGVHRWHRASSIAVNFSDETSTSQANKSKRPDNSHMTSNQFGDSDIVTDMLPR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2005 766 MobiDBLite consensus disorder prediction 172 205 - -
Mibi04g2005 766 MobiDBLite consensus disorder prediction 730 758 - -
Mibi04g2005 766 MobiDBLite consensus disorder prediction 290 309 - -
Mibi04g2005 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Mibi04g2005 766 CDD STKc_IRAK 436 702 - -
Mibi04g2005 766 FunFam cold-responsive protein kinase 1 401 505 - -
Mibi04g2005 766 Gene3D Transferase(Phosphotransferase) domain 1 506 714 - -
Mibi04g2005 766 MobiDBLite consensus disorder prediction 172 266 - -
Mibi04g2005 766 Pfam Protein kinase domain 431 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2005 766 MobiDBLite consensus disorder prediction 121 160 - -
Mibi04g2005 766 Gene3D Phosphorylase Kinase; domain 1 397 505 - -
Mibi04g2005 766 SMART serkin_6 430 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2005 766 Coils Coil 311 334 - -
Mibi04g2005 766 ProSiteProfiles Protein kinase domain profile. 430 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2005 766 SUPERFAMILY Protein kinase-like (PK-like) 406 700 IPR011009 -
Mibi04g2005 766 ProSitePatterns Protein kinases ATP-binding region signature. 436 458 IPR017441 GO:0005524
Mibi04g2005 766 MobiDBLite consensus disorder prediction 130 160 - -
Mibi04g2005 766 MobiDBLite consensus disorder prediction 285 337 - -
Mibi04g2005 766 MobiDBLite consensus disorder prediction 730 766 - -
Mibi04g2005 766 FunFam Putative LRR receptor-like serine/threonine-protein kinase 506 712 - -
Mibi04g2005 766 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 292 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2005 Mibi-ChrMibi04 51099623 51109584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2005 397 751 Receptor kinase-like Gene Family AT1G56120 47.354 1.62e-99 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi04g2005 Pkinase 8.1e-45 CL0016