Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1955 ATGCCTTCTTCTTCCACCACCATTATCTCCAAATGCACCATCTTCCCCCACCATAAATCCCCCCTCACCACCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTTTCCTGCCACTACATTCAAAAAGGCGTCCTCCTCCCCCTCCCTCCCTTCCCCTTCCATCACCTCCTCCCCTCCCTCAAACACTCCCTCTCCCTCACTCTCTCTCATTTCCCCTCCTTCGCCGGCCGCTTCATCACCGACGACGTTACCGGCCACGTCCACGTCATCACCGACGATTCCGGCGTCGATTTCATCCACGCCGCCGCCAAACACCTCACAATCGACTCTATCCACAACCCTAACCTCACCGACGTCCCTAATTGCTTCAAGGAGTTCTTCGTCTACGACAATACTATCTCCTTCTCCGGCCACCACCTCCCCCTCGCCGCCGTCCAGGTCACCGAGCTCGCCGACGGCGTCTTCATCGGAATCACCGTCAACCACTCCCTCACCGACGGCACCTCCTTCTGGCACTTCTTCAACACCTTCGCTGAGATCTGTAAAGGAGCCAAAAAGATCTCAAACTCGCCGGATTTCACTCGCGACACTGTTTTCAACTCCCCGGCGGTTCTCAAAGTCCCCGCCGGCGGCCCTAAGCTTACCTTCGACGCCGACCAGCCTCTCCGGGAGAGAGTTTTCCACTTCACTAGGGAATCCATCCAGAAACTGAAGCTCAGAGCGAACAACAATGGCGATGTCCGTACAAGTATTTCAGATTTGACGGAGGTCATGGGGAAGAAGGTTAACGACGTTTGGAAAACCGCCAACGGCGTTAGTAACGGCGTCAGTAACGGAGAAATCTCGTCTTTTCAGTCCTTATCTGCTCAGCTGTGGCGCTCGGTGACACGTGCGAGGAAACTTGACGAGTCCAAAACGTCGACGTTTCGTATGGCGGTGAATTGTCGTCATCGTCTACGGCCGAAGATGGATGCGTTTTACTTCGGGAACGCGATCCAGAGCATCCCGACCGTTGCTGAAGTGGGTGAGATCTTATCGAATGATCTACGGTGGTGCGCGAGTCTGTTGCATCAAAACGTGGTCGCGCATGATGATGCTATGGTGCGACGCGGAGTAGAGGATTGGGAGAGATCTCCGCGGTTGTTTCCGCTTGGGAATTTCGACGGTGCGATGATAACGATGGGGAGTTCGCCGCGTTTTCCTATGTACGATAATGATTTTGGGTGGGGCCGACCGTTAGCGGTTAGGAGTGGGAAGGCGAATAAGTTTGATGGGAAGATTTCTGCGTTTCCTGGTAGGGAAGGAAATGGGAGTGTTGATTTGGAAGTCGTTTTGAAGCCTGAAACTATGGAGGGGCTTGAAAACGACAGTGAGTTTATGCAGTATGTATCACCCATCGTGTGA 1404 0.5406 MPSSSTTIISKCTIFPHHKSPLTTLKLSVSDLPMLSCHYIQKGVLLPLPPFPFHHLLPSLKHSLSLTLSHFPSFAGRFITDDVTGHVHVITDDSGVDFIHAAAKHLTIDSIHNPNLTDVPNCFKEFFVYDNTISFSGHHLPLAAVQVTELADGVFIGITVNHSLTDGTSFWHFFNTFAEICKGAKKISNSPDFTRDTVFNSPAVLKVPAGGPKLTFDADQPLRERVFHFTRESIQKLKLRANNNGDVRTSISDLTEVMGKKVNDVWKTANGVSNGVSNGEISSFQSLSAQLWRSVTRARKLDESKTSTFRMAVNCRHRLRPKMDAFYFGNAIQSIPTVAEVGEILSNDLRWCASLLHQNVVAHDDAMVRRGVEDWERSPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGNGSVDLEVVLKPETMEGLENDSEFMQYVSPIV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1955 467 Gene3D - 6 208 IPR023213 -
Mibi04g1955 467 SUPERFAMILY CoA-dependent acyltransferases 58 183 - -
Mibi04g1955 467 Pfam Transferase family 6 460 - -
Mibi04g1955 467 Gene3D - 210 455 IPR023213 -
Mibi04g1955 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1955 Mibi-ChrMibi04 50301859 50303262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1955 60 455 Monolignol Biosynthesis Gene Families AT5G48930 26.415 8.81e-33 127