Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1954 ATGAACAGGGGAATTGAAGTACTCTCTCCAGCTTCCTACCTCCAGAACTCTAATTGGCTGTTCGAGGAAGGCAAAGGAACAAGATGGACTCCAGAAGAGAACAAGAGGTTTGAGAATGCTTTGGCTCTGTTTGATAAGGATACACCAGATCGTTGGATGAAGGTGGCAGCCATGATTCCGGGTAAAACTGTGGGTGATGTTATCAAACAGTACAGAGAACTGGAAGAAGATGTGAGTGTCATTGAGGCAGGGCTTTTCCCAGTCCCTGGCTACACTAATAGTTCCTTCACATTGGAGTGGGTCAATGGCCAAGGCTTTGATGGGTTTAACCAATTTTATACTTCTGGTGGAAAAAGGGGTGCCCCCACTAGGCCTTCTGAGCAGGAAAGGAAGAAAGGAGTTCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGGCTGAAGAAGTATGGGAAAGGGGACTGGAGAAACATATCTCGCAATTTTGTGACGACAAGGACGCCTACTCAAGTTGCGAGTCATGCTCAGAAATATTACATCAGGCAGCTTACAGGAGGGAAAGATAAGAGGAGATCAAGTATCCATGATATAACAATGGTCAATCTCCAAGACACCAAACCTCCTTCATCAGATCACAGTCCTATCATCAGACCTGCTTCTTCAAATCATCCTACAAATAAGGTTTTAAATCCACACCAAAATCTGAAATTAGTTGGCAGGGTTAAACAGGAATATGACATGTCAACGGTTTTCAATCCCACAAATATTGGGAACGTGTTCTTGGCACCAATCTATGGGATTTCTTCTCATGAATCAAAACCACAGGATCAGTGTATGCTCAGAGGTACTCTGATCCATGGATTTGATCATGGACCTTATAATGATACTATTCTTCAAATGCAATCAATGCAGCATCAGTGA 924 0.4361 MNRGIEVLSPASYLQNSNWLFEEGKGTRWTPEENKRFENALALFDKDTPDRWMKVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLFPVPGYTNSSFTLEWVNGQGFDGFNQFYTSGGKRGAPTRPSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYYIRQLTGGKDKRRSSIHDITMVNLQDTKPPSSDHSPIIRPASSNHPTNKVLNPHQNLKLVGRVKQEYDMSTVFNPTNIGNVFLAPIYGISSHESKPQDQCMLRGTLIHGFDHGPYNDTILQMQSMQHQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1954 307 MobiDBLite consensus disorder prediction 117 136 - -
Mibi04g1954 307 Gene3D - 134 184 - -
Mibi04g1954 307 Gene3D - 21 88 - -
Mibi04g1954 307 CDD SANT 135 179 IPR001005 -
Mibi04g1954 307 SMART sant 25 77 IPR001005 -
Mibi04g1954 307 SMART sant 132 182 IPR001005 -
Mibi04g1954 307 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Mibi04g1954 307 CDD SANT 28 74 IPR001005 -
Mibi04g1954 307 Pfam Myb-like DNA-binding domain 135 179 IPR001005 -
Mibi04g1954 307 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Mibi04g1954 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Mibi04g1954 307 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 237 IPR043363 -
Mibi04g1954 307 FunFam transcription factor MYB1R1 134 185 - -
Mibi04g1954 307 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Mibi04g1954 307 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Mibi04g1954 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Mibi04g1954 307 FunFam Transcription factor SRM1 21 88 - -
Mibi04g1954 307 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1954 Mibi-ChrMibi04 50237408 50238659 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi04g1954 Myb_DNA-binding 3.3e-12 CL0123