Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1953 ATGAATTCTGTGGTTGGAGTGCTTCTTTTCATTTGTTGCATTTTCCCAGCTTTGGTTGACTGCAGGGTCAGAAACTACAAATTCCATGTTGTATCAAGGAACATAACAAGATATTGTTCAAGCAAGTCCATTGTCACCGTCAATGGCAAGTTTCCTGGCCCCACTCTCTACGCCAGAGAAGGCGATAATGTTCTTGTTAAAGTCGTCAACCGTGTCAACCACAACGTTTCCATCCACTGGCATGGTGTCCGGCAACTGCGAACTGGTTGGTCAGATGGGCCAGCGTATATCACACAGTGTCCGATTGGACCGGGGCAAAGCTTTGTGTACAACTTCACTATTATTGGTCAAAGAGGGACACTTCTGTGGCATGCACATATCAACTGGCTTAGGTCAACAGTACATGGAGCCATAGTGATATTACCAAAGCGTGGTGTGCCTTATCCATTCCCAAAACCAGACCATGAAAAAGTGTTAGTGTTGGCTGAATGGTGGAAATCTGATACTGAGGATATTATTAATGAAGCTCTTAAATCAGGAGTGGCTCCAAATATCTCTGATGCTCACATCATCAATGGCCTTCCTGGCTCTGTTGCCAATTGTTCCTCTCAAGAGGCATTCAACTTGGGTGTAGAAAGTGGGAAGACATATTTATTAAGGATCATCAATGCTGCACTCAATGAAGAACTCTTCTTCAAGATCGCTGGCCACAACTTTACCATCGTCGAAGTGGATGCCACCTACGTCAAGCCATTCACCACCGACACCATCATCATCGCTCCAGGCCAAACCGCCAACATCCTCCTAAACACCCACCAAAAGCCTGGAAAATACCTAATCATAGCTTCTCCTTTCATGGATGCTCCTGTAGCCGTAGATAACCAAACAGCCACAGCCACACTTCACTACAATACTACCACTCTCTCCGGTACTTCCCCTACAGTTCTCACTACCCCACCTCCCAAAAACGCCACACAAATAGCCAACCAGTTCATAAACTCTCTCAAAAGCCTGAATTCCCCAAAATACCCCGCCAAAGTTCCCATAGAAATTGACCATTCTCTTTTCTTCACTATAGGCTTAGGGGTAAACCCTTGCCCTACTTGTAAAGCAGGGAATGGAAGTAGGGTTGTGGCGGCTATAAATAATGTGACTTTTGTTATGCCTACCACGTCCTTGCTTCAAGCTCATTATTACAACATTAAGGGTGTGTTTACCGCTGATTTTCCTGCTAACCCACCACATGTTTATAACTATACTGCGAATATAACTCAGAATATACAGACACAGAATGGGACTAGGCTTTATAGGGTACCCTATAATTCCACGGTTCAGATTGTGTTACAGGATACAGGTGTCATTGCCCCAGAGAGCCATCCTGTTCATCTTCATGGGTTCAATTTCTTTGTGGTGGGCAGAGGAGTAGGGAATTATGATGCCAAGGAAGATCCCGAGAAATTTAATCTTGTTGATCCTGTGGAGAGAAACACTATTGGAGTGCCTACTGGTGGCTGGACTGCTATTAGATTCACAGCAGATAATCCAGGAGTATGGTTCTTGCACTGCCATTTTGAAGTACACACGACATGGGGGCTAAAGATGGCATTTTTGGTGGATAATGGAAAAGGTCCTAAACAATCTTTGATTCCACCACCTAAAGATCTTCCAAAATGCTGA 1677 0.4448 MNSVVGVLLFICCIFPALVDCRVRNYKFHVVSRNITRYCSSKSIVTVNGKFPGPTLYAREGDNVLVKVVNRVNHNVSIHWHGVRQLRTGWSDGPAYITQCPIGPGQSFVYNFTIIGQRGTLLWHAHINWLRSTVHGAIVILPKRGVPYPFPKPDHEKVLVLAEWWKSDTEDIINEALKSGVAPNISDAHIINGLPGSVANCSSQEAFNLGVESGKTYLLRIINAALNEELFFKIAGHNFTIVEVDATYVKPFTTDTIIIAPGQTANILLNTHQKPGKYLIIASPFMDAPVAVDNQTATATLHYNTTTLSGTSPTVLTTPPPKNATQIANQFINSLKSLNSPKYPAKVPIEIDHSLFFTIGLGVNPCPTCKAGNGSRVVAAINNVTFVMPTTSLLQAHYYNIKGVFTADFPANPPHVYNYTANITQNIQTQNGTRLYRVPYNSTVQIVLQDTGVIAPESHPVHLHGFNFFVVGRGVGNYDAKEDPEKFNLVDPVERNTIGVPTGGWTAIRFTADNPGVWFLHCHFEVHTTWGLKMAFLVDNGKGPKQSLIPPPKDLPKC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1953 558 SUPERFAMILY Cupredoxins 347 558 IPR008972 -
Mibi04g1953 558 Pfam Multicopper oxidase 409 541 IPR011706 GO:0005507|GO:0016491
Mibi04g1953 558 CDD CuRO_2_LCC_plant 158 303 IPR034285 -
Mibi04g1953 558 ProSitePatterns Multicopper oxidases signature 2. 521 532 IPR002355 GO:0005507
Mibi04g1953 558 ProSitePatterns Multicopper oxidases signature 1. 516 536 IPR033138 -
Mibi04g1953 558 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Mibi04g1953 558 Gene3D - 367 558 IPR008972 -
Mibi04g1953 558 Gene3D - 21 145 IPR008972 -
Mibi04g1953 558 TIGRFAM laccase: laccase 21 558 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mibi04g1953 558 FunFam Laccase 154 341 - -
Mibi04g1953 558 Pfam Multicopper oxidase 157 304 IPR001117 -
Mibi04g1953 558 PANTHER MULTI-COPPER OXIDASE 32 546 IPR045087 -
Mibi04g1953 558 SUPERFAMILY Cupredoxins 150 323 IPR008972 -
Mibi04g1953 558 SUPERFAMILY Cupredoxins 18 172 IPR008972 -
Mibi04g1953 558 FunFam Laccase 12 142 - -
Mibi04g1953 558 Pfam Multicopper oxidase 32 143 IPR011707 GO:0005507
Mibi04g1953 558 CDD CuRO_3_LCC_plant 404 541 IPR034289 GO:0005507
Mibi04g1953 558 Gene3D - 153 340 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1953 Mibi-ChrMibi04 50223193 50227406 Dispersed/Wgd