Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1908 ATGTCGAGTATACAGGTTTCCCATGTGGATTTAGAGCAAGGAGGTTATCACCGTTCGGTGGTGGCGAGTGACGTCAGCGCTGACGGGAGTGTATGCTTCTCTGACGCCGATGATGGGTCTTGTTACTCTCATTTCTATTCAACATACGGTGGTTCATATGATGATTGTAGTTTTGCCTGTGTTTCTGATTCTGAGGTTAGGTGTGTTGCTGATTCTAGGAGGGCTTCTTCTGTGAGTGATTGTTCAGTGGAGGTTGAAATTGAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGTAGGATTTGTCACTTGGGTTTGGAGAGTGATAGTAATGATGAATCTGGGGTTCCAATTGAATTGGGATGTTCTTGTAAGGATGATCTAGCTGCTGCTCACAAACACTGTGCTGAGGCCTGGTTCAAGATCAAAGGGAATAGGACCTGTGAAATTTGCCATTCAATTGCCCGGAATGTTTATGGAGGGAACGAGGAGGTGACTGAGCATTCAAGTGATGGCAATAATGCTACTACTGCAACTGCAACAGCAGTGTCCACACCAGCACCTTCTTCTGCAGAAACTCGAAGATTCTGGCATGGCCATAGGTTCTTGAATTTTCTGCTTGCTTGTATGGTTTTTGCTTTTGTCATATCATGGCTTTTTCACTTTAATGTACCTTCTTCCTAA 702 0.4416 MSSIQVSHVDLEQGGYHRSVVASDVSADGSVCFSDADDGSCYSHFYSTYGGSYDDCSFACVSDSEVRCVADSRRASSVSDCSVEVEIESGVPEIKVHLAKVERDCRICHLGLESDSNDESGVPIELGCSCKDDLAAAHKHCAEAWFKIKGNRTCEICHSIARNVYGGNEEVTEHSSDGNNATTATATAVSTPAPSSAETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1908 233 MobiDBLite consensus disorder prediction 171 192 - -
Mibi04g1908 233 PANTHER ZINC FINGER, RING-CH-TYPE 21 232 - -
Mibi04g1908 233 SUPERFAMILY RING/U-box 102 160 - -
Mibi04g1908 233 CDD RING_CH-C4HC3_MARCH 105 158 - -
Mibi04g1908 233 ProSiteProfiles Zinc finger RING-CH-type profile. 97 164 IPR011016 GO:0008270
Mibi04g1908 233 SMART ringv_2 104 158 IPR011016 GO:0008270
Mibi04g1908 233 Pfam RING-variant domain 105 157 IPR011016 GO:0008270
Mibi04g1908 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 165 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1908 Mibi-ChrMibi04 49532859 49535724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1908 63 233 C3H Transcription Factor Family AT5G05830 61.988 4.80e-71 214