Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1901 ATGGCTGATCAAAAGCAAGAGGTGAGGCTTTTTGGAATAGTGGGAAGCCCAGAGACGACGAGAGTAGAGATTGCTCTGAAACTCAAGGGAGTTTCATATGAGTATGTTCATGAGTCGCCAACCAACAAAAGTGATCTTCTTCGCAAGTATAACCCCGTTTACAACAAGGTTCCTGTTCTTGTTCACCATGGAAAACCAGTTTGTGACTCTCTTGTGATCCTTGAATATGTTGATGAGACTTGGAAAAGTTGTCCCATTTTGCCTTCTGACCCTCACCACAGAGCCTTGGCTCGTTTCTGGTCTAAGTTCATTGACGACAAGGTGATACCTGCAATATTCAAAGCAGCATTGAACCCTAACGAGAAGGAGAGGGAAAAGGGGAAGGAAGAAGTATTGGAGGCTCTGCAAATAATGGAAAATGAGCTGAGAGGCAAGTTCTTCAATGGAGATTCAATTGGGATTGTGGACATTGCTGCTGTGTATGTTGCTTTCTGGCTTCCGATAATTCAAGAAGCTGGTGGCCTAAATCTCTTTAGTGCTGACAAATTCCCAAAGCTTGAGAAATGGACTCATGAATTAGTGAATCTGCCTTATGTGAAACCAACATTGCCTCCCAGAGAAAAGCCCCTTGCCTACTACAAAAATCTCATTCAGAGTTTTGCTTCTTCCAAGTAG 675 0.4326 MADQKQEVRLFGIVGSPETTRVEIALKLKGVSYEYVHESPTNKSDLLRKYNPVYNKVPVLVHHGKPVCDSLVILEYVDETWKSCPILPSDPHHRALARFWSKFIDDKVIPAIFKAALNPNEKEREKGKEEVLEALQIMENELRGKFFNGDSIGIVDIAAVYVAFWLPIIQEAGGLNLFSADKFPKLEKWTHELVNLPYVKPTLPPREKPLAYYKNLIQSFASSK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1901 224 CDD GST_N_Tau 8 81 - -
Mibi04g1901 224 FunFam Tau class glutathione S-transferase 87 223 - -
Mibi04g1901 224 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Mibi04g1901 224 FunFam Glutathione S-transferase GSTU6 3 87 - -
Mibi04g1901 224 Pfam Glutathione S-transferase, C-terminal domain 110 197 IPR004046 -
Mibi04g1901 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 208 IPR045073 -
Mibi04g1901 224 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Mibi04g1901 224 Gene3D - 90 224 - -
Mibi04g1901 224 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Mibi04g1901 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Mibi04g1901 224 Gene3D Glutaredoxin 1 89 - -
Mibi04g1901 224 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Mibi04g1901 224 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Mibi04g1901 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Mibi04g1901 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1901 Mibi-ChrMibi04 49262137 49263303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1901 3 223 Glutathione S-transferase Gene Family AT3G09270 47.768 7.23e-74 221