Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi04g1874 | ATGCTCGCCGGAATCCTAATCACAGTGACAGTTTTCCGGTACCAGAAACAGAAAGCAGCCCAAATCAGAAGCATGAGCATAGCACAAGACATATTGAACGCCGACAACAACAGTGGCAGATCAGCCAAAATTTTCACCATCAAAGAAATAACAAAAGCCACCAACAACTTCTCCAAACACAACCTCATCGGCTCCGGCGGCTTCGGCGACGTCTTCAAGGGCACCCTCACCGACGGTACCCTAACCGCCATCAAGCGCGCCAAGCTCGGAAACACCCGAGCCGCCGACCAGATCCTCAACGAGGTTAGAATCCTCTGCCAACTCAACTACCGTAACCTCGTACGCCTCCTAGGTTGTTGCATTGAACTCCCAAATAATGAACCCCTCCTTATCTATGAGTATGTCCCCAATGGGACCCTCTTCGAACGCCTCCATAATGCTGGAAAGTGGGCCCCACTCCGGTGGCATCAAAGGTTAAAAATCGCCCATCAAACTGCTGAAGGACTTTCCTACCTTCATAACTCGGCCATACCAAGAATCTTCCATAGAGATGTGAAGTCAAGCAATATTCTCTTAGATGATGAACTTAATGCTAAAGTTTCAGACTTTGGACTTTCTAAGTTGGCTAAGAATGAAGCAAGCCATGTTACAACGTGTGCACAAGGGACATTAGGGTATCTTGATCCGGAGTATTATATGAATTTTCAGGTTACGGATAAGAGTGATGTGTATAGTTTTGGGGTGGTTTTGTTGGAGATATTGACGGCGAAGAAGGCTTTGGATTTTGGGAGGGAAGAGGAAGATGTGAACTTGGTTGTGTTTGTGAAGAGGGCTATGAAGAAGATGGGGTTGATGGAGGTGATTGATCCGACGGTTAGGATTGGAGCTAGTAACTTGGAGTTGGAGAGTATGAAGGAGTTGGGGTGTCTTGCGATTGCTTGTTTGGATGAACAGAGGCAAAATAGGCCCCCCATGAAAGATGTTGCTCACGAGATTCAACACATTCTTCACTCTCTTTCTTCTGATGATACTATTGCCTTCAAGAAGGATGAAGGTTCCGATGAGTATATTCTACAATAA | 1080 | 0.4611 | MLAGILITVTVFRYQKQKAAQIRSMSIAQDILNADNNSGRSAKIFTIKEITKATNNFSKHNLIGSGGFGDVFKGTLTDGTLTAIKRAKLGNTRAADQILNEVRILCQLNYRNLVRLLGCCIELPNNEPLLIYEYVPNGTLFERLHNAGKWAPLRWHQRLKIAHQTAEGLSYLHNSAIPRIFHRDVKSSNILLDDELNAKVSDFGLSKLAKNEASHVTTCAQGTLGYLDPEYYMNFQVTDKSDVYSFGVVLLEILTAKKALDFGREEEDVNLVVFVKRAMKKMGLMEVIDPTVRIGASNLELESMKELGCLAIACLDEQRQNRPPMKDVAHEIQHILHSLSSDDTIAFKKDEGSDEYILQ | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi04g1874 | 359 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 11 | 335 | IPR045274 | GO:0007166 | |
| Mibi04g1874 | 359 | FunFam | Wall-associated receptor kinase-like 20 | 135 | 344 | - | - | |
| Mibi04g1874 | 359 | CDD | STKc_IRAK | 63 | 335 | - | - | |
| Mibi04g1874 | 359 | PIRSF | ILK | 39 | 349 | - | - | |
| Mibi04g1874 | 359 | SMART | serkin_6 | 57 | 340 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi04g1874 | 359 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 29 | 134 | - | - | |
| Mibi04g1874 | 359 | ProSiteProfiles | Protein kinase domain profile. | 57 | 337 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi04g1874 | 359 | ProSitePatterns | Protein kinases ATP-binding region signature. | 63 | 85 | IPR017441 | GO:0005524 | |
| Mibi04g1874 | 359 | Gene3D | Transferase(Phosphotransferase) domain 1 | 135 | 354 | - | - | |
| Mibi04g1874 | 359 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 330 | IPR011009 | - | |
| Mibi04g1874 | 359 | Pfam | Protein tyrosine and serine/threonine kinase | 60 | 331 | IPR001245 | GO:0004672|GO:0006468 | |
| Mibi04g1874 | 359 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 180 | 192 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi04g1874 | 359 | Gene3D | Phosphorylase Kinase; domain 1 | 28 | 134 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi04g1874 | Mibi-ChrMibi04 | 48975225 | 48976304 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi04g1874 | 29 | 344 | Receptor kinase-like Gene Family | AT5G02070 | 63.777 | 1.01e-145 | 425 |
Transcription factors information