Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1869 ATGGAGCAACAAGGTCAATTCTGGATGTGGACGAAGAGGAAGAAGCACTCTTCGAGCTCTTGTAACAATCTCATAACCTCATCATCAACAAAACCATCTTCTTCTTATGATGATTCTTCATGGGAAGAGCAAGCCTTTGCAGAAGATGCTTCTGGGCCTCTTGGTGGATGCATATGGCCACCAAGATCATACACTTGCAGTTTCTGTAGAAGAGAGTTCAGATCAGCACAAGCTCTTGGAGGCCACATGAATGTTCATAGAAGAGATAGAGCCAGACTTAAGCAGCCTTCAAGCCCCCAAAACAATAATAATGAACTTCATCAAATCCCAAATACTTCTTCCTTTATGGGTTTCATATACCCTAATTGTTCTATTACTAACCCTAATTCTTCTTCTTCTATTATTCCCCCACCACAAGGGCATAGGTTGGCTTCTAAATACTGTTCTCCTCTCTATTCTTCTTTCAAATCCAACTGCTCGAATTTGGCTGAAGCTGAAGACGAAGCTGAAGAGAAGATCACAGAGGTTTTGGATTGTGGTGGGTTTGATGAGGATAATGGAAAAACGGATTTGGCTTTTAGTTTAAATTTGGTGGTGTGTAGAGGTATTGAAACAAAGGAGGAAGATATAATTAGTTGCAATAAGAAGAGGAGAACTTGTGAAACTTCAACGATTCTTCCTCTCTTCCCAAACTCAAATTCTTCAGAAGATGAATTTAGCCCTAGCTCAAGAAATGCTGAAGAGCTAGATCTGGAGCTAAGGTTGGGTCAAAGCAAGCACAAAGTATAG 789 0.4056 MEQQGQFWMWTKRKKHSSSSCNNLITSSSTKPSSSYDDSSWEEQAFAEDASGPLGGCIWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPQNNNNELHQIPNTSSFMGFIYPNCSITNPNSSSSIIPPPQGHRLASKYCSPLYSSFKSNCSNLAEAEDEAEEKITEVLDCGGFDEDNGKTDLAFSLNLVVCRGIETKEEDIISCNKKRRTCETSTILPLFPNSNSSEDEFSPSSRNAEELDLELRLGQSKHKV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1869 262 MobiDBLite consensus disorder prediction 1 40 - -
Mibi04g1869 262 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mibi04g1869 262 MobiDBLite consensus disorder prediction 231 250 - -
Mibi04g1869 262 MobiDBLite consensus disorder prediction 80 104 - -
Mibi04g1869 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Mibi04g1869 262 SUPERFAMILY beta-beta-alpha zinc fingers 61 90 IPR036236 -
Mibi04g1869 262 SMART c2h2final6 64 86 IPR013087 -
Mibi04g1869 262 Pfam C2H2-type zinc finger 64 88 - -
Mibi04g1869 262 Gene3D Classic Zinc Finger 61 114 - -
Mibi04g1869 262 PANTHER OS07G0101800 PROTEIN 35 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1869 Mibi-ChrMibi04 48916135 48916923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1869 1 95 C2H2 Transcription Factor Family AT2G37740 56.842 2.81e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi04g1869 zf-C2H2_6 4.6e-06 CL0361