Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1868 ATGGAGTTTAACCTTAAAAACAAAGACAAATCTGAGAGAATAAGGTGGGGATATTCCTCAGACGAAGTAACACAAGTGAGATCATATACTTGTGCTTTCTGTCAGAAAGGGTTTTCAAACGCACAAGCTCTTGGTGGTCACATGAACATTCATAGACGAGATCGAGCTAGGCTGAGGCAACAATATTCTCTTGACACCAACCCTAATAAAAATGATCTTTATTATCAAAACCCTGATGATATTAATCATAAAATGCCATCCATTTTTCCAGAGGCAAAGGTCAATATTGGTATTTCCCCAGAAATTTCTTCTCATCATCAGCTTCCTATTTTTTTCAGCGTAGAAGAGAAGATGGAGTTGGACCTTGAGCTTCGTTTGGGTCCTGAGCCAGTGAAGCGGACACCACCGACTCTGAGACGATTCTTTTGA 429 0.4009 MEFNLKNKDKSERIRWGYSSDEVTQVRSYTCAFCQKGFSNAQALGGHMNIHRRDRARLRQQYSLDTNPNKNDLYYQNPDDINHKMPSIFPEAKVNIGISPEISSHHQLPIFFSVEEKMELDLELRLGPEPVKRTPPTLRRFF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1868 142 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Mibi04g1868 142 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Mibi04g1868 142 PANTHER OS07G0101800 PROTEIN 24 72 - -
Mibi04g1868 142 Gene3D Classic Zinc Finger 7 82 - -
Mibi04g1868 142 SUPERFAMILY beta-beta-alpha zinc fingers 26 56 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1868 Mibi-ChrMibi04 48861321 48861749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1868 21 133 C2H2 Transcription Factor Family AT3G09290 37.748 2.80e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi04g1868 None None None