Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1862 ATGGCCACTTTTCTTCTTCTTAAACTCTCCTCTGTTTTTCTCTTCCTTCTCATCATCCCTGTTTCTTCCCAACCAAACGAAGTCTTCTTCTCCGGATTCAAAGGTGCCCAAAACAACTTATCCCTTACCGGAACAGCAGAAATCGAAAAGAATGGAATCTTGAAATTAACAAACCAGACAAGCAGATTAATGGGCCATGCTTTTTACCCATCCCCATTTCAGTTCAAGAACACTTCCTCTGGTAAAGCTTCCTCTGGTAAAGCTTTCTCCTTTTCTGCTTCCTTCGCTCTTGTCACTGTCCCTGTCTTCTACAAACTCGGTGGCCATGGCTTAGCTTTCACCATAGCTTCTTCCAAAGAACTCAAAGCTTTACCAAGTCAATACATCGGCCTCCTTAATGCCTCCGACAACGGAAACTTCTCAAATCACTTGTTCGCCGTTGAGTTCGACACAGTACAAGATTTCGAATTCGGAGACATCAATGATAACCATGTGGGGATCGACTTAAACAGCTTAGAATCCAACGCATCTGAAACTGCAGCGTATTACAATGATGATTCAGGTTTGACTAAGCAAGATCTGAATATCTCTGGTGGCACTCCGATTATGGCTTGGGTTGATTATGATTCAGCGGCTAATCTTGTGAGTGTTACTCTTTCCCCTTCTTCAAAAAAACCCAAAAAACCATTGTTAACATTCCCTGTAGATCTCTCTCCAATTCTTAAAGATTATATGTATGTTGGGTTCTCTGCTTCCACTGGTCTTCTTGCTAGTTCCCATTATATTTTGGGATGGAGTTTTAAAATCAATGGTCCAGCTCAATCTCTTGATCTTTCTTCTCTCCCACAACTTCCTGGTCCTAAGAAGAATCCTACAAAGCTCATAATTGGAGTGACAGTTCCTGTTATAGTAATTACATTGTCGGCTATAGCTTTGGGGGTTTATTTGTTTAGGAAAATTAAGAACGCTGATATAATAGAAGCTTGGGAGCTAGAAATTGGGCCACATAGATATTCCTATGAAGAGCTGAAGAAAGCTACAAGGGGTTTTAAGGATAAGGAGCTTCTTGGACAAGGTGGGTTTGGTAGAGTTTACAAGGGAACACTTCCTAGTTCGAGAATTGAAGTTGCAGTTAAACGAATTTCCCATGAATCCAAACAAGGCCTTAGGGAATTCGTCTCGGAAATCGCCAGCATTGGGCGGCTCCGTCACCGGAATCTTGTTCAACTCCTTGGTTGGTGTCGCCGGCGAGGCGACCTCCTACTTGTATATGATTACATGGCAAATGGGAGCTTAGACAAGTACCTATTTGATCGACCAGAGGCTATTCTCACTTGGGAACAGAGGATTAAGATCGTTAAAGGTGTTGCTTCAGGTCTTTTGTATCTCCATGAAGGGTATGAACAAGTTGTGATTCATAGAGATGTTAAAGCAAGTAATGTGTTACTAGACAATGAGATGAATGGAAGATTAGGGGATTTTGGATTGGCTAGGTTATATGAACATGGGGCTAATCCAAGTACTACTAGAGTGGTGGGTACATTGGGGTATTTAGCGCCGGAATTGCCTCGAACTGGTAGAGCCACCACGGGTTCTGATGTGTATGCATTTGGTGCTCTGATGTTGGAAGTTGTTTGTGGAAGAAGGCCTATTGAACCGAAGGCGTTACCGGAGGAACTTGTTCTGGTGGATTGGGTTTGGGAAAAGTATAGGGAAGGTAGGCTTTTGGAGGTGGTGGATCCAAAGTTGAATGGGGATTATGATGAGGAGGAAGTAGTGATGGTGTTGAAGTTGGGTTTGATTTGTTCTAATGATGTTCCTAATAATAGGCCAAGTATGAAGCAATTGGTGATGTTTTTGGAAGGGGAAGTGGAATTGCCAGAGAGTTTGAGGAAACCAGGAGGAGGGAGTCATAATCAAAACCATGAAGGGTTTGATGAGTTCTTGTTGAATTCTTTTGCGTCTTCTTCATTTGGGAAGATGAGTGCTAGTTCTTACAGAGAAACAGACGGTACTCATTTTGCTTCTTTCAATACTACTTCACCTCATTCTCTTCTCCATACCAGAGGAGAAACAAGGTGA 2082 0.4241 MATFLLLKLSSVFLFLLIIPVSSQPNEVFFSGFKGAQNNLSLTGTAEIEKNGILKLTNQTSRLMGHAFYPSPFQFKNTSSGKASSGKAFSFSASFALVTVPVFYKLGGHGLAFTIASSKELKALPSQYIGLLNASDNGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDLNSLESNASETAAYYNDDSGLTKQDLNISGGTPIMAWVDYDSAANLVSVTLSPSSKKPKKPLLTFPVDLSPILKDYMYVGFSASTGLLASSHYILGWSFKINGPAQSLDLSSLPQLPGPKKNPTKLIIGVTVPVIVITLSAIALGVYLFRKIKNADIIEAWELEIGPHRYSYEELKKATRGFKDKELLGQGGFGRVYKGTLPSSRIEVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDYMANGSLDKYLFDRPEAILTWEQRIKIVKGVASGLLYLHEGYEQVVIHRDVKASNVLLDNEMNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTGSDVYAFGALMLEVVCGRRPIEPKALPEELVLVDWVWEKYREGRLLEVVDPKLNGDYDEEEVVMVLKLGLICSNDVPNNRPSMKQLVMFLEGEVELPESLRKPGGGSHNQNHEGFDEFLLNSFASSSFGKMSASSYRETDGTHFASFNTTSPHSLLHTRGETR 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1862 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 287 IPR013320 -
Mibi04g1862 693 CDD lectin_legume_LecRK_Arcelin_ConA 30 271 IPR001220 GO:0030246
Mibi04g1862 693 ProSiteProfiles Protein kinase domain profile. 350 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1862 693 SMART serkin_6 350 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1862 693 SUPERFAMILY Protein kinase-like (PK-like) 332 627 IPR011009 -
Mibi04g1862 693 PANTHER - 21 627 - -
Mibi04g1862 693 Gene3D - 27 270 - -
Mibi04g1862 693 CDD STKc_IRAK 356 622 - -
Mibi04g1862 693 Pfam Legume lectin domain 30 281 IPR001220 GO:0030246
Mibi04g1862 693 FunFam L-type lectin-domain containing receptor kinase S.4 24 275 - -
Mibi04g1862 693 FunFam Lectin-domain containing receptor kinase A4.3 335 426 - -
Mibi04g1862 693 Pfam Protein tyrosine and serine/threonine kinase 353 620 IPR001245 GO:0004672|GO:0006468
Mibi04g1862 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mibi04g1862 693 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Mibi04g1862 693 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Mibi04g1862 693 Gene3D Transferase(Phosphotransferase) domain 1 427 634 - -
Mibi04g1862 693 FunFam L-type lectin-domain containing receptor kinase S.4 427 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1862 Mibi-ChrMibi04 48793381 48795462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1862 21 633 Receptor kinase-like Gene Family AT3G55550 61.613 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g1862 PK_Tyr_Ser-Thr 1.8e-46 CL0016