Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1856 ATGAGCATCGGTCGCCTTCGCCATCGAAACGTCGTATCTCTTTTGGGATATTGCAGGCGGAAAAGTGAGCTTCTTTTGGTCTATGATTTCATGCCAAATGGGAGCTTAGATAAATATCTTCACAACCAACCTAGTGTGACACTAAATTGGATGCAAAGATTACGAATCATCAAAGGGGTAGCTTCGAGATTTTGCTATTTGCATGAAGAATGGGAGCAAGTAGTAGTACATAGAAACATAAAAGCAATCAATGTTTTGTTGGATCCGGAGTTCAATGGAAAGTTAGGAGATTTTGGTCTTGCAAAATTATATGATCATGGGAGTGATCCTGCAACTACACGTGTGGTTGGGACTTTGGGATATCTCACACCTAAGAACAAGGAGAGCCACCACAAAGTCCGATATTTTTGCTTTTGGTGTTTTTATGCTGGAAGTTGTATGTGGAAGAAGGCCTATAGACTTGGTAAGTGA 471 0.4076 MSIGRLRHRNVVSLLGYCRRKSELLLVYDFMPNGSLDKYLHNQPSVTLNWMQRLRIIKGVASRFCYLHEEWEQVVVHRNIKAINVLLDPEFNGKLGDFGLAKLYDHGSDPATTRVVGTLGYLTPKNKESHHKVRYFCFWCFYAGSCMWKKAYRLGK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1856 156 Pfam Protein kinase domain 4 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1856 156 SUPERFAMILY Protein kinase-like (PK-like) 3 125 IPR011009 -
Mibi04g1856 156 Gene3D Transferase(Phosphotransferase) domain 1 1 138 - -
Mibi04g1856 156 FunFam - 31 124 - -
Mibi04g1856 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1856 156 PANTHER - 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1856 Mibi-ChrMibi04 48728972 48729442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1856 1 143 Receptor kinase-like Gene Family AT3G53810 67.133 6.32e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g1856 Pkinase 6.1e-22 CL0016