Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1852 ATGCAACGATTTCGAATAATCAAAGGTGTAGCTTCAGGATTATGCTATTTGCATGAAGAATGGGAGCAAGTTGTGGTATATAGAGACATAAAAGCAAGCAACGTTCTTCTAGATTCTGAGTTGGATGGAAGGTTAGGAGATTTTGGTCTTGCAAGATTATATGATCATGGAAGTGACCCTGCAACAACTCATGTGGTGGGGACAGTGGGATATCTTGCACCAGAGAGCACAACTACAGGGAGGGCCACCACAAAGTCTAATGTTTTTGCTTTTGGTGCTTTTATGCTTGAGGTTGTAAGTGGAAGAAGGCCTATAGAACGAGGAAGTGAAGAAGAATTTACGTTGGTGGATTGGGTTTATGGGTTATGGAAGAGGGGTGAGATTATTGAGGCAAGGGATCAAAATTTAGGAACAGAGTACAAAGTAGAGGAGGTAGAATTGGTGTTGAAATTGGGGCTTTTGTGCTTGAATTCTAAGGCTGGAGATAGGCCAAACATGCGACAAATTGTGCAGTATTTGAATATGGAAGTGACTTTGCCTGATATGCTTTTACCATTGTCATCTCCTTCTGGTTCTGTGTATGGATTTGGGAGTCACCTAGACTTTGACGACATTTGA 618 0.4159 MQRFRIIKGVASGLCYLHEEWEQVVVYRDIKASNVLLDSELDGRLGDFGLARLYDHGSDPATTHVVGTVGYLAPESTTTGRATTKSNVFAFGAFMLEVVSGRRPIERGSEEEFTLVDWVYGLWKRGEIIEARDQNLGTEYKVEEVELVLKLGLLCLNSKAGDRPNMRQIVQYLNMEVTLPDMLLPLSSPSGSVYGFGSHLDFDDI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1852 205 FunFam L-type lectin-domain containing receptor kinase S.4 1 185 - -
Mibi04g1852 205 Pfam Protein kinase domain 5 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1852 205 PANTHER - 2 177 - -
Mibi04g1852 205 SMART serkin_6 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1852 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Mibi04g1852 205 Gene3D Transferase(Phosphotransferase) domain 1 1 184 - -
Mibi04g1852 205 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1852 205 SUPERFAMILY Protein kinase-like (PK-like) 2 184 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1852 Mibi-ChrMibi04 48593477 48594094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1852 2 205 Receptor kinase-like Gene Family AT3G53810 64.734 1.63e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g1852 Pkinase 8e-25 CL0016