Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1843 ATGGGTCGTCTACGCCATCGAAACCTTGTATCTCTTTTGGGATATTGCAGGCGAAAAGCAAGATTATATGATCATGGGGTTGATCCTGCAACTAAACATGTGGTGGGAATATTGGGGTATATGGCACCAGAGAACACAAGAACAAGGAAAGCCACCACAAAGTCTGATGTTTTTGCTTTTGGTGCTTTTATGTTGGAGGTTGTACGTGGAAGAAGGCCTATAGAGAAAGGAAGAGAAGAAGACTTTGTTTTGGTGGATTGGGTTTATGGGTTGTGGAAAAGGGGTAAGATTGTTGAGGTAACGGATCAGACTTTAGGAATAGAGTGCAAAGCAGAGGAGGTAGAATTTGTGTTGAAATTGTGA 363 0.4215 MGRLRHRNLVSLLGYCRRKARLYDHGVDPATKHVVGILGYMAPENTRTRKATTKSDVFAFGAFMLEVVRGRRPIEKGREEDFVLVDWVYGLWKRGKIVEVTDQTLGIECKAEEVEFVLKL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1843 120 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1843 120 SUPERFAMILY Protein kinase-like (PK-like) 3 111 IPR011009 -
Mibi04g1843 120 PANTHER - 20 120 - -
Mibi04g1843 120 Gene3D Transferase(Phosphotransferase) domain 1 13 120 - -
Mibi04g1843 120 Pfam Protein tyrosine and serine/threonine kinase 38 82 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1843 Mibi-ChrMibi04 48288194 48288793 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1843 20 120 Receptor kinase-like Gene Family AT2G37710 64.078 2.28e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g1843 PK_Tyr_Ser-Thr 2.4e-07 CL0016