Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1829 ATGCTTGACTTCTCATCAGCCATTTCAGAGGGATCAATAATGATGGAGGAACCATCAGCAGTAATGGCAGCTTCCTATTTGTCAGATGGGTCATCATCAGAAGAAGATCATGACCTATTCAGAGAGCTTTTAGATCATAACTATAATTATGAGTCTCCACCTTTCTCCTCCACTAATACTGAACCCTCACCTTCTTCCACCATCATTAACTCCTTCATCTCCAACATTTATTCAGGTCCTACCATTTCTGATATTGAAAATGCCTTGTCATTTACCAACCACAAACAACATTATTCCCAACAAGACTTCTCCTTATCCAGGGTATCCATACTGGAGAGAGGACTGAGCAAGATAGAGAATAAGTATACTCTGAAAATGAAGTGCTTTGGGAATAATGGGACGGGTGATGATGGGTATAAGTGGAGGAAGTATGGACAGAAATCAATTAAGAACAGTCCAAATCCTAGGAGCTATTATAGGTGCACTAATCCAAGGTGTAATGCCAAGAAGCAAGTGGAAAGATGCACTGAGGACCCTGACACTCTTATAATCACTTATGAAGGGCTTCACCTTCACTTTGCTTATCCATATTTTCTTATGACTCAGGCCCATGAACCCCTTTTACCACCAGCAAAGAAGCCCAAGACCAATTCGATCACTTCTAAGGCCCAAGCCCATCAAGGCCCACATGCATTAGAAGCCAACCAGGCCCAGGCCCATGAGATAAGTGTGGGGTCGCAAGGGTTGCTTGAAGACATGGTGCCTTTGATTATTCGTAATCCTACAATTAGTAGTATAAATCCTTTGCAGTCCTAA 816 0.4228 MLDFSSAISEGSIMMEEPSAVMAASYLSDGSSSEEDHDLFRELLDHNYNYESPPFSSTNTEPSPSSTIINSFISNIYSGPTISDIENALSFTNHKQHYSQQDFSLSRVSILERGLSKIENKYTLKMKCFGNNGTGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERCTEDPDTLIITYEGLHLHFAYPYFLMTQAHEPLLPPAKKPKTNSITSKAQAHQGPHALEANQAQAHEISVGSQGLLEDMVPLIIRNPTISSINPLQS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1829 271 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g1829 271 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 224 IPR044810 GO:0003700
Mibi04g1829 271 ProSiteProfiles WRKY domain profile. 130 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g1829 271 SMART WRKY_cls 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g1829 271 MobiDBLite consensus disorder prediction 208 232 - -
Mibi04g1829 271 Gene3D WRKY domain 123 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi04g1829 271 SUPERFAMILY WRKY DNA-binding domain 132 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1829 Mibi-ChrMibi04 47936319 47938525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1829 68 266 WRKY Transcription Factor Family AT5G43290 43.478 5.23e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi04g1829 WRKY 1.3e-25 CL0274