Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1804 ATGTCAAGAACAGGGTCAACAAGATGGAGTCCAACCCCAGAACAAGTGATGATATTGGAGCAATTGTATAGGAGTGGGATAAGAACTCCTACTGCTTCCCAAATCCAACACATAACAACTCACCTCTGCTTCTATGGTAGGATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCATAAGGCTAGAGATCGGCAGAAGCTTAGGAGGAAACTAAACAAACAACTCCAATTGCAGCAGCAGCAACAGAATATGCTAGTCCAACATCAACGCCAAGTGGTTGATCATCAGGATAACATTCATCATCATTTCTGGTCTTTTGGTAGAGGCTTTGATTCTTCTGCTTCACATGGTTTTCATGGTTCTTCTGCCCAACAAGTTTCTTTGTATAACACATCTTCTTTGCTTTCTCATCAGGGAGAAACAGGAGAGAATTCATCAGAGACAAGGAAGAAGAGTGAGAAGAAGCAAGAAAGTGTGGTGGAATTGGATAAAACAAAGACGTCATCAATTTTTTGCAACTATGGTACGATGAGTTGTTGTCATTGGAGTTTTGAGGATGTTAATGAAGAATCCTCTTATTGTTGCACGACAAGCAGGCCTCTAAAGACTCTTGATCTCTTTCCGATCACTTCCACCAAACTCAAAGAAGACAACTTCAATTTAACACTTTGA 675 0.403 MSRTGSTRWSPTPEQVMILEQLYRSGIRTPTASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQNMLVQHQRQVVDHQDNIHHHFWSFGRGFDSSASHGFHGSSAQQVSLYNTSSLLSHQGETGENSSETRKKSEKKQESVVELDKTKTSSIFCNYGTMSCCHWSFEDVNEESSYCCTTSRPLKTLDLFPITSTKLKEDNFNLTL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1804 224 Gene3D - 1 67 - -
Mibi04g1804 224 MobiDBLite consensus disorder prediction 144 160 - -
Mibi04g1804 224 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Mibi04g1804 224 CDD homeodomain 7 67 IPR001356 GO:0003677
Mibi04g1804 224 FunFam WUSCHEL-related homeobox 4 6 73 - -
Mibi04g1804 224 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Mibi04g1804 224 SMART HOX_1 4 71 IPR001356 GO:0003677
Mibi04g1804 224 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Mibi04g1804 224 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 217 IPR044555 GO:0003700|GO:0099402
Mibi04g1804 224 MobiDBLite consensus disorder prediction 137 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1804 Mibi-ChrMibi04 47599917 47601369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1804 1 74 Wox Gene Family AT2G28610 81.081 3.86e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mibi04g1804 Homeodomain 3.4e-17 CL0123