Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1799 ATGGCCACCGCGCAGCACCGGAGATCCGTCACATTGGATTGGGACGGTCTCGGCGACGACGACGAAGACGACGGCGGCGACGATCTCTTCTACGAGACGCGGGATCGGATGTCGTCGGTCGCTCCGGCCGATCTAGAAGCGTCCTCCTCGTCGTCCGATGACGAATTTGAGGAAAGCCGGATGTCGTTCAGCTCCAACATCTCCCCAATTGAAGTATCAAAGCCTTTTCCGGCGGATTTTGCCGCCTTCAGCTCCGAATACGACATGTGGATGGCTTCTCCGGGATCGATCACGGAGCGAAGAAAGCGATTACTCCTCGGTATGGGCCTCAATGAGAACAAGGAATTGTTAAAGATCACAAGCATGGCTTTGGATCGCGCAATTTCAAAGAAATTCGAAAATGCAGAAACAGAGAGTATTGATTGTAACTCAAATTCAAATTCAAATTCATCATCACCAACAAGTACAAGTAAATCCCCTCCTCCTCCTCCTCCTAATTCATCTTCTTCTTCTTCCCCTGTGATTTCAAAAACAGAGGAGAAGCTAACTTCAGAAACAGAGGAGAAAACAGGGGAGAAACAGAGTAGAAGATCGAGGAGGCCTTCGATTATCCCCTTCGTCCTTGGACGGTCACGATCCGAAGGTGATATCGCTGCCTTTTCGATGCCGAAATTCCGAAAGGAGGAATTCATAGGAAAAATCTCCAAGCAACGAATAACAAGAACATCATCGGCCGTGACATTTTCCGGCGGCGGCGGCTCTTGTCCGAACCACGACGAATCCCGAGCCGCGGCGGAGGCGAAAAAGCCGGGCCCACCGCCGGCTCCGGCGAGGCGAAACGGGTCGAAGATGACGTCGGTGAAGTCAAAATGGGGATTAGGGGCTTTCTTCTTGATTAAGAATTTGGACACAGGGAAGGAATTTATAGTAAATGAGTCAAGGGAAGAAGATGGGATGTGGAACAGATTAAGTGATTTACAAACAGGGAAGAAGTTAACAATGGAGGAATTCGAGAAACATCTGGGGTATTCTCCAATGGTGAAAGAATTAATGAGCCGTGAGAAAGTGATCAGAAGTAACAGCAATAGTTTAGGATTTGAGAGAAATAAACTAACAAATAATCAGAGTTCATATTTCTCGAGGAGTTTAAGGAAAAGCAGAAGAACAGGGGCTGCTCTGTTGAAGAACATAAGAGAAGTAGCTTCTGGGTTCATCGGAGAAAGAGAAAGAGACGAATCCCAGAAATCGGATTCGGAGCAGAAGACGGCGAAGATTGAACAATGGGTGAGGGTGAGGCAGAGTGGGAAATCAATGAAGGAACTTTCAGCTTTGCATTTGTGTCAGGAGTTGAAGGCTCATGAAGGGTGTATATGGACGATTAAGTTTAGTAATGATGGGCATTATATGGCGAGTTCTGGGGAGGATAAGGTGATACATGTGTGGGAAGTTCAGGAATTTGAGGTTGATTCGATTAATCCGATGTTGATTGGGTCGTTGCAGGAAAGGAATGGGAATAAGGAGAAGAAGGGGAGATATGGAAGTAAGAGAGGAGGTAGTAATGTGATTCCTGGTTATGTTCATGTTCCTGAGACTGTTTTCTCTTTCTCTGATAAACCTTATTGCTCTTTCCATGGCCATTCTGATGATGTTTTGGACCTTTCTTGGTCTAAATCTCAGTTCAACCCAATGGATGAAGAATACTTCATAAGTGGGTGTTTGGATGCAAAGGTGAGGATATGGAACATTCCTCAACGCTTTGTGGTGGATTGGGTTGATACCCACGAAATGGTCACTGCTATTTCTTACACTCCTGATGCTCAAGCTGCTTTTGTTGGTTCTCATAAAGGAAGTTGTCGTATGTATAGCATAGAAGATTGCAAATTAAGTCAAATAAGCACAATTGAGCTTCGGCGAAAGAAGAAATCTCATTTAAGAAAAGTGACTGGTTTTCAGTTTGCTCCAACTAATCCATCAGAAGTGCTGGTTACTTCAGCTGATTCCAGAATCAGAATTGTCAGAGATTCCAGAGTTGTTCATAAGTTTGTAGGTTTCCGAAATGCAAACAGCCAAATTTCAGGTTCATTTAGTCCAAATGGAAGATACATAATCAGTGCAAGTGAGGACTCAAACGTATATGTATGGAAGAATGATGGGCATGCAAAAGCCAGAAGGCTGATTCTAACTCATTCCCATGAGCAATTCCAATGCAAAGATGTGTTGATAGCAATCCCATGGCCTCGCACCATTAAAGGTGACCCTCCATTAGGACCAGCTCTCCACTCAAAGAGACACTCAAAACATTCTTCATCTCAAACACCAAATCCTCCTTCTTCACAAGGATCTCCACTTCATCATTCTAATAACAATAAGGCAACAAATTTGCCTCCTCTTGTTCCCAGAAAGAAGAACAACCATAACAACCATGGCTTTGATACCATCTCTCCTCCCGCAATTACACGCACTATATCCGGGATTAATGGAGTAGTTTCACACACTCCTAGTTGTAGTAAGAGCAGGTGGTCACCATTTTCTAGGAATAAGGTCAATAGTAACAATGGTGACCATCATGTCATGGTGGAAGAGGAAGATCCTGCAGCAATATCTCGCAATGGTTCTGGAAATGGGGATTCGTTTTCTTCTTCTGATTCGGCTTCCATGAGGTATGGGGGTGACTCGCCTTCTATATGTGCTTCTAGTGGGTCAACATCTTCTGGATCTTGGTCAATGCAGTGTGATAATAACGGCCACACCAACTCAAGTTCTCATGCTTCAGCTTGGGGTTTGGTGATTGTAACAGCTGGACTTGGAGGTGAAATAAGATGTTATCAAAATTTTGGGTTACCTAAAAAGGTATGA 2856 0.445 MATAQHRRSVTLDWDGLGDDDEDDGGDDLFYETRDRMSSVAPADLEASSSSSDDEFEESRMSFSSNISPIEVSKPFPADFAAFSSEYDMWMASPGSITERRKRLLLGMGLNENKELLKITSMALDRAISKKFENAETESIDCNSNSNSNSSSPTSTSKSPPPPPPNSSSSSSPVISKTEEKLTSETEEKTGEKQSRRSRRPSIIPFVLGRSRSEGDIAAFSMPKFRKEEFIGKISKQRITRTSSAVTFSGGGGSCPNHDESRAAAEAKKPGPPPAPARRNGSKMTSVKSKWGLGAFFLIKNLDTGKEFIVNESREEDGMWNRLSDLQTGKKLTMEEFEKHLGYSPMVKELMSREKVIRSNSNSLGFERNKLTNNQSSYFSRSLRKSRRTGAALLKNIREVASGFIGERERDESQKSDSEQKTAKIEQWVRVRQSGKSMKELSALHLCQELKAHEGCIWTIKFSNDGHYMASSGEDKVIHVWEVQEFEVDSINPMLIGSLQERNGNKEKKGRYGSKRGGSNVIPGYVHVPETVFSFSDKPYCSFHGHSDDVLDLSWSKSQFNPMDEEYFISGCLDAKVRIWNIPQRFVVDWVDTHEMVTAISYTPDAQAAFVGSHKGSCRMYSIEDCKLSQISTIELRRKKKSHLRKVTGFQFAPTNPSEVLVTSADSRIRIVRDSRVVHKFVGFRNANSQISGSFSPNGRYIISASEDSNVYVWKNDGHAKARRLILTHSHEQFQCKDVLIAIPWPRTIKGDPPLGPALHSKRHSKHSSSQTPNPPSSQGSPLHHSNNNKATNLPPLVPRKKNNHNNHGFDTISPPAITRTISGINGVVSHTPSCSKSRWSPFSRNKVNSNNGDHHVMVEEEDPAAISRNGSGNGDSFSSSDSASMRYGGDSPSICASSGSTSSGSWSMQCDNNGHTNSSSHASAWGLVIVTAGLGGEIRCYQNFGLPKKV 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1799 951 MobiDBLite consensus disorder prediction 870 892 - -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 138 155 - -
Mibi04g1799 951 Gene3D - 399 509 IPR015943 GO:0005515
Mibi04g1799 951 MobiDBLite consensus disorder prediction 135 207 - -
Mibi04g1799 951 SUPERFAMILY WD40 repeat-like 447 727 IPR036322 GO:0005515
Mibi04g1799 951 MobiDBLite consensus disorder prediction 1 62 - -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 768 794 - -
Mibi04g1799 951 ProSiteProfiles Trp-Asp (WD) repeats profile. 694 715 IPR001680 GO:0005515
Mibi04g1799 951 Gene3D - 534 745 IPR015943 GO:0005515
Mibi04g1799 951 ProSiteProfiles Trp-Asp (WD) repeats profile. 543 582 IPR001680 GO:0005515
Mibi04g1799 951 PANTHER WD REPEAT DOMAIN 44 559 948 IPR040324 -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 180 199 - -
Mibi04g1799 951 ProSiteProfiles Trp-Asp (WD) repeats profile. 450 484 IPR001680 GO:0005515
Mibi04g1799 951 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 543 582 - -
Mibi04g1799 951 ProSitePatterns Trp-Asp (WD) repeats signature. 469 483 IPR019775 -
Mibi04g1799 951 SMART WD40_4 674 715 IPR001680 GO:0005515
Mibi04g1799 951 SMART WD40_4 906 943 IPR001680 GO:0005515
Mibi04g1799 951 SMART WD40_4 443 482 IPR001680 GO:0005515
Mibi04g1799 951 SMART WD40_4 633 673 IPR001680 GO:0005515
Mibi04g1799 951 SMART WD40_4 536 581 IPR001680 GO:0005515
Mibi04g1799 951 SMART WD40_4 583 622 IPR001680 GO:0005515
Mibi04g1799 951 Pfam WD domain, G-beta repeat 448 481 IPR001680 GO:0005515
Mibi04g1799 951 Pfam WD domain, G-beta repeat 694 715 IPR001680 GO:0005515
Mibi04g1799 951 Pfam WD domain, G-beta repeat 541 581 IPR001680 GO:0005515
Mibi04g1799 951 MobiDBLite consensus disorder prediction 830 853 - -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 830 854 - -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 241 286 - -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 752 816 - -
Mibi04g1799 951 MobiDBLite consensus disorder prediction 866 892 - -
Mibi04g1799 951 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 450 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1799 Mibi-ChrMibi04 47535477 47540776 Transposed