Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1790 ATGTGTCATTCTCAGAGGCTAATAAGAAGTTGTGTCAGGACACTAACAAGGAGCAGTATTGTTCAGAAGAGATTTTCCCCTAATTCTTACTCCCATTCTTCTTCTTCTTCTTCTGCAAATTTCACCACTATGTCTAGCACTGTTGGTCTGACGATTCCATGCAAAGCAGCAGTAGCATGGGAAGCAGGGAAACCATTGGTGATGGAAAGAGTGGAAGTAGCTCCACCACAGGCCATGGAAGTGAGGATCAAAGTCAAATATACTTCTCTCTGCCACACTGATCTCTACTTCTGGGAGGCCAAGGGGCAAACTCCTCTGTTCCCCAGAATTTTTGGGCACGAGGCAGCTGGAATTGTGGAGAGCGTTGGGGAAGGAGTGAAAGACTTGGAAGCAGGGGATCACGTGCTTCCTGTGTTCACAGGGGAATGTGGAGAATGTGCACATTGCAAGTCTGAGGAAAGCAACATGTGTGACCTTCTGAGAATAAATACAAACAGAGGAGTGATGATCAGTGATGGAAAAAGCAGATTCTCCATTAATGGCAACCCTATCAACCACTTCCTTGGCACTTCCACTTTCAGCGAATACACTGTGCTTCATTCTGGCTGCCTCGCAAAAATCAACCCTCTGGCACCTATGGATAAAGTCTGTGTCCTTAGCTGCGGCATTTCAACTGGATTGGGAGCAACTCTAAATGTGGCAAAACCAAAGAAAGGTTCTTCTGTTGCAGTCTTTGGTCTTGGAACTGTCGGCCTTGCTGCTGCAGAGGGAGCAAGAATTGCTGGGGCATCTAGGATCATTGGAATTGACTTGAATGCTAGTCGATTTGAAGAAGCCAAGAAATTTGGAGTGACTGAGTTTATAAATCCAAAGGATCATGATAAACCAGTTCAAGAGGTTATTGCAGAGATGACAAACGGTGGAGTGGACCGTAGTGTGGAGTGCACTGGAAATATCAACGCTATGATCTCTGCTTTTGAATGTGTACATGATGGATGGGGAGTTGCAGTGCTTGTAGGCGTACCCAACAAGGATGCAGTGTTCATGACAAAACCAATCAATGTGCTAAACGAAAGAACACTAAAAGGGACTTTCTTTGGGAACTACAAGCCCAGGACTGACCTTCCTTCTATTGTTGACATGTACATGAACAAGAAGTTGGAATTGGATAAATTTATAACACACAGAGTTCCATTCTCTGAGATTAACAAGGCGTTCGAGCTTATGATAAGGGGAGAGGGACTACGCTGTATTATTGACATCAACGAATAG 1272 0.4465 MCHSQRLIRSCVRTLTRSSIVQKRFSPNSYSHSSSSSSANFTTMSSTVGLTIPCKAAVAWEAGKPLVMERVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVKDLEAGDHVLPVFTGECGECAHCKSEESNMCDLLRINTNRGVMISDGKSRFSINGNPINHFLGTSTFSEYTVLHSGCLAKINPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSSVAVFGLGTVGLAAAEGARIAGASRIIGIDLNASRFEEAKKFGVTEFINPKDHDKPVQEVIAEMTNGGVDRSVECTGNINAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSIVDMYMNKKLELDKFITHRVPFSEINKAFELMIRGEGLRCIIDINE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1790 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 212 386 IPR036291 -
Mibi04g1790 423 PANTHER ALCOHOL DEHYDROGENASE 51 419 - -
Mibi04g1790 423 FunFam Alcohol dehydrogenase class-P 226 364 - -
Mibi04g1790 423 CDD alcohol_DH_plants 52 420 - -
Mibi04g1790 423 Gene3D - 226 364 - -
Mibi04g1790 423 FunFam alcohol dehydrogenase 1-like isoform X1 62 225 - -
Mibi04g1790 423 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 112 126 IPR002328 GO:0008270|GO:0016491
Mibi04g1790 423 Gene3D - 62 413 - -
Mibi04g1790 423 Pfam Alcohol dehydrogenase GroES-like domain 80 204 IPR013154 -
Mibi04g1790 423 Pfam Zinc-binding dehydrogenase 250 374 IPR013149 -
Mibi04g1790 423 SUPERFAMILY GroES-like 371 419 IPR011032 -
Mibi04g1790 423 SUPERFAMILY GroES-like 47 229 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1790 Mibi-ChrMibi04 47410409 47415077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1790 80 421 Monolignol Biosynthesis Gene Families AT1G72680 24.355 7.03e-13 67.8