Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1786 ATGGCGGTGACTAAACTTTTCTCTCTCCCCATTTTCATTTTCACATTCTTCTTCTTCTTCAGTCACTACCCCAACAAATCTAATGCCATAACAACCTCTTTGCCTCCATCATCATCTTCTTCTTCCCCTTCACCTTCACCTTCTTCTTCAGATATTGAGCTTATATTGGGTAAAATCAGAGATACCCTTCAAGGTAATGCCGATAATCTTGTTTTATCTTCATGGAATTCGACTGTACCCCTTTGTCAATGGAGGGGACTCAAATGGGTTTTCTCAAATGGCTCTCCCCTTTCATGCAATGACTTGTCTTCACCACAATGGGGTAATCTTTCACTTTTTAGAGACCCATCTTTACGTTTAATCTCTCTTCAGCTTCCTTCTGCGAATCTCTCTGGTTCTCTTCCTAGGGAGATTGCAGAGTTTCCTATGCTTCAGAGTCTTTACCTGAATATTAATTCATTGAAAGGGACAATTCCTATTGAGCTTGGGTATAGTTCCTCACTTAAAGACGTCGTTTTGGATGATAATATGTTGAGTGGTTCTTTACCCCCATCGATCTGGAATTTGTGTGATAAGCTTGTTTCTGTTAGGCTCCATGGTAACTTGTTTTCCGGTTCTCTTCCTGAACCGGCATTGCCTGAATCTTCTTGCAAGAATCTGCAGTTTCTTGATTTGGGTAACAACAATTTTTCTGGGGTTTTTCCTGAATTCATCACACATTTTGGTGGGCTGAAACAGCTTGACTTGGGGAATAATATGTTTTCTGGTTCAATTCCTCAAAGCTTATCTGGGCTAAGTAGGCTAGAGAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTACCCACTTTTGGTGAATCATCATCCAAATTTGGTGTAGAGGTTTTTGAAGGGAATAACCCTGGATTGTGTGGGGTACCTTTAAGAGCTTGTAATGGAACCTCTAGATTGAGCGCTGGCGCAGTTGCTGGTATAGTTATCACTCTCATGACTGCAGCTGTGGTTTTAGTTTCTTTGCTTATTGGGTATATGCAAAATAAGAGGAGGAAGGGTAAGGGAGATAGTGGATATGAATTGGAGGAAGATGAAGAAGAAGATGATGATGAAGAAAATGGCGGTGATAATGGTGGTGCTATCGGTGGTGGTGGTGGTGGTGAGGGGAAGCTTATGTTGTTCCAAGGCGGCGAGAATTTATCGTTAGATGATGTATTGAATGCGACGGGGCAAGTTATGGAGAAGACATGTTATGGGACTGTTTATAAGGCAAAGCTAGCTGATGGAGGAACCATTGCTTTGAGGTTGCTGAGAGAAGGTAGCTGCAAGGATAGGGCTTCATGCTTGCCCGTTATTAAGCAATTGGGAAGGATTCGACATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAAGGGAAGAGAGGAGAGAAGCTTCTTATCTATGACTATCTTCCTCTCAGAACTCTTCATGATCTTTTACATGAAACTAAAGCTGGAAAACCGGTTCTAAACTGGGCCAGGCGACACAAGATTGCACTGGGAATAGCCAGGGGACTAGCATATCTTCATACAGGACTTGATGTTCCAATCACTCATGGGAATGTACGATCCAAGAATGTGCTAGTTGATGAGTTCTTCATTGCCAGGCTCACTGAGTTTGGGCTGGACAAGCTAATGATTCCTGCTGTAGCTGATGAAATGGTTGCGCTGGCGAAAACAGATGGCTACAAGGCTCCAGAGCTTCAAAAGATGAAGAAATGCAACTCGAGGACCGATGTTTATGCTTTTGGAATATTACTGTTGGAGATATTGATAGGGAAGAAACCAGGCAAGAACGGGAGGAGCGGGGAGGTTGTGGATCTGCCTTCCATGGTGAAAGTGGCAGTGTTGGAGGAAACAACAATGGAAGTGTTTGATGTGGAGCTTCTGAAAGGGATAAGGAGTCCAATGGAAGATGGGTTGGTGCAAGCATTGAAGGTAGCAATGGGATGTTGTGCACCAGTGGCTTCAGTGAGACCAAGCATGGAGGAAGTTGTGAGACAGTTGGAGGAGAATAGGCCTAGGAATAGGTCTGCTTTATATAGCCCTACAGAAACAAGAAGTGGCAGTGGCACCCCTTTTTGA 2121 0.4323 MAVTKLFSLPIFIFTFFFFFSHYPNKSNAITTSLPPSSSSSSPSPSPSSSDIELILGKIRDTLQGNADNLVLSSWNSTVPLCQWRGLKWVFSNGSPLSCNDLSSPQWGNLSLFRDPSLRLISLQLPSANLSGSLPREIAEFPMLQSLYLNINSLKGTIPIELGYSSSLKDVVLDDNMLSGSLPPSIWNLCDKLVSVRLHGNLFSGSLPEPALPESSCKNLQFLDLGNNNFSGVFPEFITHFGGLKQLDLGNNMFSGSIPQSLSGLSRLEKLNLSHNNFSGVLPTFGESSSKFGVEVFEGNNPGLCGVPLRACNGTSRLSAGAVAGIVITLMTAAVVLVSLLIGYMQNKRRKGKGDSGYELEEDEEEDDDEENGGDNGGAIGGGGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLREGSCKDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFIARLTEFGLDKLMIPAVADEMVALAKTDGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEVVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKVAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1786 706 Gene3D Ribonuclease Inhibitor 54 191 IPR032675 -
Mibi04g1786 706 FunFam Leucine-rich repeat receptor-like protein kinase 217 312 - -
Mibi04g1786 706 Pfam Protein tyrosine and serine/threonine kinase 410 681 IPR001245 GO:0004672|GO:0006468
Mibi04g1786 706 Gene3D Ribonuclease Inhibitor 192 314 IPR032675 -
Mibi04g1786 706 ProSiteProfiles Protein kinase domain profile. 406 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1786 706 SUPERFAMILY L domain-like 87 310 - -
Mibi04g1786 706 MobiDBLite consensus disorder prediction 682 706 - -
Mibi04g1786 706 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 685 - -
Mibi04g1786 706 SUPERFAMILY Protein kinase-like (PK-like) 415 682 IPR011009 -
Mibi04g1786 706 Gene3D Phosphorylase Kinase; domain 1 390 482 - -
Mibi04g1786 706 MobiDBLite consensus disorder prediction 687 706 - -
Mibi04g1786 706 Gene3D Transferase(Phosphotransferase) domain 1 484 698 - -
Mibi04g1786 706 MobiDBLite consensus disorder prediction 359 374 - -
Mibi04g1786 706 MobiDBLite consensus disorder prediction 349 380 - -
Mibi04g1786 706 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1786 Mibi-ChrMibi04 47375441 47378269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1786 49 706 Receptor kinase-like Gene Family AT3G24660 74.659 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi04g1786 PK_Tyr_Ser-Thr 2.5e-25 CL0016