Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1772 ATGCGAAGAAGACAAGAAGGTCCAAACTGTAGGATGAAAGAGATTATTGTCGTTGCTCTTGTTATGTTGAAGATTTGTTGTCAAGTTGCAATTTCTGGTTCACATGTTCCGTACCTTCCTGGTTTTCAAGGCCTGCTCCCTTTTCATCTTGAAACTGGGTATGTGGGAGTGGGATCAGAAGAAGGAGGAGGAGAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCACAAGAGGACCCTCTTATGCTTTGGCTTACTGGTGGACCTGGTTGCTCTTCTTTCTCAGGCCTCATGTTTGAAATAGGTCCAACCGCATTCAAAGTTGAGAAATACAATGGTACCCTCCCAAATTTGGTTTTGAGGCCACAAGCGTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTATTGGCAGCGGCTTCTCTTATGCGACCACCCCTAATCTTCAACGAGGTGATTGGAGTACAATTAAGCATGCCCATCAATTTCTTAGAAAGTGGCTAATTGAACACCCAAGATTTATGTCAAATAAAGTTTATATAGGAGGCGACTCATATTCTGGCACTCCAATTCCTCCTATTGTTCTAGAAATTTCAAATGGAAATGAAGAAGGCATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCTGTGACGACAACGGAAGAAGAAAATTATCTACCCTCATTTGCGCATGGAATGTCAATCATTCCCTATGAACTTTATATGCTCATGTCCGGACTTGATGAATATTCCACTTTGGATCCCAAATGTGAGTTGGCTGCACGTAGGCCTCATGGATTTTGGAGTAGGAGATCTCTCATCAACAAATTTCGAAGGCCTTTTAGTTCTCGCCTTGCAATGCCACCTTTATATTGCAAAAGTTATCCATATTTCCTCGGCTACCATTGGATTGAGGATGATGAGGTTCAGGAGGCACTTCATATCCGAAAGGGTACCATAAGGAATTGGCAACGTTGTGACCCCTTTAACTATGATTACGACATCGTCAATGCATTTCCATATCATGTAAATCTAAGCCATAAGGGCTATCGATCTTTGATTTACAGTGGAGATCATGACCCGGTAATTACATTTATGGCAACTCAAGCATGGATCAGAGATTTAAACTACTCCATTGTTGAAGATTGGAGACCTTGGCTTGCCAATGGCGAGGTTGCAGGATTTACGAGAACGTATTCTAATCAGATGACATTTGCCACTGTAAAGGGTGCTGGACATATAGCTCCTGAGTACAAATCTCAAGAATGTTCTGCCATGTTCATTAGATGGATATCTTCTGAACCTCTGTAA 1329 0.4176 MRRRQEGPNCRMKEIIVVALVMLKICCQVAISGSHVPYLPGFQGLLPFHLETGYVGVGSEEGGGEVFYYFIESENNPQEDPLMLWLTGGPGCSSFSGLMFEIGPTAFKVEKYNGTLPNLVLRPQAWTKACSIIFVDLPIGSGFSYATTPNLQRGDWSTIKHAHQFLRKWLIEHPRFMSNKVYIGGDSYSGTPIPPIVLEISNGNEEGIQPWINLQGYVLGNPVTTTEEENYLPSFAHGMSIIPYELYMLMSGLDEYSTLDPKCELAARRPHGFWSRRSLINKFRRPFSSRLAMPPLYCKSYPYFLGYHWIEDDEVQEALHIRKGTIRNWQRCDPFNYDYDIVNAFPYHVNLSHKGYRSLIYSGDHDPVITFMATQAWIRDLNYSIVEDWRPWLANGEVAGFTRTYSNQMTFATVKGAGHIAPEYKSQECSAMFIRWISSEPL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1772 442 Gene3D alpha/beta hydrolase 44 441 IPR029058 -
Mibi04g1772 442 FunFam Carboxypeptidase 297 441 - -
Mibi04g1772 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Mibi04g1772 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Mibi04g1772 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Mibi04g1772 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 409 422 IPR001563 GO:0004185|GO:0006508
Mibi04g1772 442 SUPERFAMILY alpha/beta-Hydrolases 37 441 IPR029058 -
Mibi04g1772 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 425 IPR001563 GO:0004185|GO:0006508
Mibi04g1772 442 Pfam Serine carboxypeptidase 40 438 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1772 Mibi-ChrMibi04 47049834 47054872 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1772 305 442 Calmodulin-binding Proteins AT2G22960 56.835 6.37e-52 171