Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1706 ATGAAACGCCCCATCGACGACATCGTTTCCCCCTTACCTCCCTCCGCCGCCGCCGCCGCCGCCGGAGCCGCAAAACCGGTTTTCTTAACCAAAGCTCAACGTGAACAATTGGCCCTTCAACGACGCCAAGATGAAATCGCCGAACAAAGACGCCGTCAAGAACAATTACTCTCTCGGAATCGCCAATCTGACCCTAATTCCGATTCTAAACCCTCCGATTCCGACCGCCGGGACCGGGACCGGGACCGAGACCGAGACCGCGATCGCGATCGCGACCACCGGGACCGGGAACGGGACCGGGACCGAGAGCGAGAGCGAGATAGGGCTCGAGATCGGGACCGGGAAACGGACCGGAGGAATCGAGAGAGGGAGCGAGAAGAGGAGGCTAGGGCACGTGAGCGAGCTCGGACTGAGAAATTGCAAGAGAGAGAGAAGGAGAAAGAGCTTGACGCGATTAAAGAGCAGTATTTAGGATCGAAGAAACCTAAGAAGAGGGTAATTAAACCTAGTGAGAAGTTTAGGTTTTCGTTTGATTGGGAGAATACGGAGGATACTTCTAGGGATATGAATATTCTTTATCAGAACCCTCATGAAGCTCAGCTTTTGTTTGGTCGAGGGTTTAGGGCTGGAATGGATAGGAGGGAACAGAAGAAGCTTGCTGCTAAGAATGAGAAGGAGATGAGAGAACAGATTAGGAAGAAGGAGGGTGTGGAGGAGAAGCCTGAGGAGGTTGTTGCACAAAGGAGAAAGGAGGCTGCTGCTGATTTATATGATACTTTTGATATGAGGGTTGATAGACATTGGAGTGATAAGAAGCTTGAGGAGATGACTGAGAGGGATTGGCGTATATTTAGGGAGGATTTCAATATTTCATATAAGGGTTCTAAGATTCCTCGTCCAATGAGGAGTTGGGTTGAGAGTAAGTTGAGTGCTGAGCTGTTGAAGGCTGTTGAGAAGGCTGGGTATAAGACCCCTTCTCCTATTCAGATGGCTGCTATTCCTCTTGGACTTCAGCAGCGTGATGTTATCGGTGTTGCCGAGACGGGTTCGGGGAAGACGGCCGCTTTTGTGCTTCCTATGCTGAGTTACATCACGAGGCTCCCTCCCATCAGTGAGGAGAATGAGGCTGAGGGTCCCTATGCCGTGGTTATGGCGCCTACGCGTGAGCTGGCGCAGCAGATTGAGGATGAGACCGTGAAGTTTGCTCAGTATCTTGGAATCAAAGTGGTTTCCATTGTTGGTGGACAGTCAATTGAGGAGCAGGGTTTTAGGATAAGGCAGGGTTGTGAGATTGTAATTGCCACTCCTGGTCGGTTGATTGATTGCTTGGAGAGGCGTTATGCTGTTTTGAATCAGTGCAATTATGTTGTTCTTGATGAGGCTGACCGGATGATTGATATGGGGTTCGAGCCACAAGTTATGGGTGTCCTGGATGCTATGCCTTCCAGTAATCTGAAACCAGAAAATGAAGATGAGGAGCTTGATGAGAAGAGGATTTACAGAACCACTTATATGTTCAGTGCCACCATGCCTCCTGCTGTTGAGCGGCTTGCTAGGAAATACTTGAGGAACCCTGTTGTGGTAACCATAGGCACTGCAGGAAAGGCTACTGATTTGATCAGCCAGCACGTGATTATGATGAAAGAGTCTGAAAAGTTTTACAAACTGCAAAGGCTGCTTGATGAACTTAATGATAAGACAGCAATTGTATTTGTGAACACTAAGAAAAATGCTGATATGGTTGCAAAGAATTTGGATAAGGAAGGCTACCGTGTAACCACTTTGCATGGTGGCAAGTCACAGGAGCAGAGGGAGATCAGTCTTGAAGGATTTAGGACCAAGAGATATAATGTCTTGGTTGCTACTGATGTTGCAGGGCGTGGGATTGACATACCTGATGTGGCTCATGTCATAAACTATGACATGCCTGGGAATATTGAGATGTACACACATCGTATTGGACGTACTGGTCGTGCTGGGAAGACTGGTGTTGCCACAACATTCCTGACTCTTCAAGACTCTGATGTCTTTTACGATCTCAAACAGATGCTTATACAGAGTAATAGTCCTGTCCCTCCTGAATTGGCCAGACACGAGGCTTCAAAGTTCAAGCCAGGAAGTATTCCTGATAGACCACCTAGACGAAATGACACTGTATTTGCACACTGA 2169 0.4822 MKRPIDDIVSPLPPSAAAAAAGAAKPVFLTKAQREQLALQRRQDEIAEQRRRQEQLLSRNRQSDPNSDSKPSDSDRRDRDRDRDRDRDRDRDHRDRERDRDRERERDRARDRDRETDRRNREREREEEARARERARTEKLQEREKEKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREQIRKKEGVEEKPEEVVAQRRKEAAADLYDTFDMRVDRHWSDKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVESKLSAELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFRIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKFYKLQRLLDELNDKTAIVFVNTKKNADMVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDSDVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAH 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1706 722 Coils Coil 112 155 - -
Mibi04g1706 722 Pfam DEAD/DEAH box helicase 327 517 IPR011545 GO:0003676|GO:0005524
Mibi04g1706 722 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 555 699 IPR001650 -
Mibi04g1706 722 SMART ultradead3 321 543 IPR014001 -
Mibi04g1706 722 MobiDBLite consensus disorder prediction 66 147 - -
Mibi04g1706 722 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 231 699 - -
Mibi04g1706 722 CDD DEADc_DDX23 313 529 - -
Mibi04g1706 722 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 457 465 IPR000629 -
Mibi04g1706 722 CDD SF2_C_DEAD 540 669 - -
Mibi04g1706 722 MobiDBLite consensus disorder prediction 697 722 - -
Mibi04g1706 722 FunFam probable ATP-dependent RNA helicase DDX23 533 721 - -
Mibi04g1706 722 Gene3D - 263 532 IPR027417 -
Mibi04g1706 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 481 IPR027417 -
Mibi04g1706 722 Gene3D - 533 720 IPR027417 -
Mibi04g1706 722 FunFam probable ATP-dependent RNA helicase DDX23 263 532 - -
Mibi04g1706 722 MobiDBLite consensus disorder prediction 690 722 - -
Mibi04g1706 722 MobiDBLite consensus disorder prediction 40 58 - -
Mibi04g1706 722 MobiDBLite consensus disorder prediction 40 147 - -
Mibi04g1706 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 681 IPR027417 -
Mibi04g1706 722 SMART helicmild6 579 660 IPR001650 -
Mibi04g1706 722 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 302 330 IPR014014 GO:0003724
Mibi04g1706 722 Coils Coil 214 240 - -
Mibi04g1706 722 Coils Coil 32 59 - -
Mibi04g1706 722 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 333 528 IPR014001 -
Mibi04g1706 722 MobiDBLite consensus disorder prediction 220 245 - -
Mibi04g1706 722 Pfam Helicase conserved C-terminal domain 554 660 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1706 Mibi-ChrMibi04 45305260 45307428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1706 270 709 Eukaryotic Initiation Factors Gene Family AT3G13920 32.426 2.30e-60 207