Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1701 ATGTTCACGCGCCAGAGATCCACGCGCCACAACATCACCGCCGCCGCCGACGGATTGTTCCCCGGCGCCGGCGCCAGTTCCGACGACAAGCTCCGGCCTCAGATCTCCCGGCCGAACTCCGCCCGCCTCGCGGTCGCGATCCGCGCCGACTCTCTCCGCCGTGACTCCCTCCGGCAAGATTCCATCCGGCGCGATCCAATCCGGCGGGAGCGAGCGATGTCGTTCCGCGGCGGCGGATTCGACGGAGAAGAAATCGACGGCGGCGCCGGCGACGGAGGTGACGGCGGCGGAGGGAATGTCGCAGGCGGAAGGCCAAGGAGGGAGAGGCAGATGTCGGCGAGGGAGGCAGTGGCGACGCAGGAGGCGGCGGAGGCGGCTGCGATGGCGAGGGCGGCGGCGATCGCGGCGGCGGCGGAGAAGGCGGAATTGTTTGGGAATAATGGTGGGGGAGGGACGACGACGACGGTGACGATGTCGTTGATGGATTTGTTGGAGGAGACAGATAGGCAAATGGGGTTGGAGGGATCTACTTATAGGATGGATGATGATGATGATGATGATGAAGATTATGATTATGATGATGAGGATTATGGTGATGAAGATGAGGAAATAGGTGAAGAACATGATTGTTGTGTTTGTATGGTGAAGCATAGGTGTTTGGGATTTGAGCCTTGTGGGCATTTTTTCTGCAGGATGTGTTCAAGGGAGCTTACTTTGAGTAAGGGAAATTGTCCTCTTTGTAACAATTTTGTCTTGGAGATTCTTGAGGTTTTCTGA 777 0.5804 MFTRQRSTRHNITAAADGLFPGAGASSDDKLRPQISRPNSARLAVAIRADSLRRDSLRQDSIRRDPIRRERAMSFRGGGFDGEEIDGGAGDGGDGGGGNVAGGRPRRERQMSAREAVATQEAAEAAAMARAAAIAAAAEKAELFGNNGGGGTTTTVTMSLMDLLEETDRQMGLEGSTYRMDDDDDDDEDYDYDDEDYGDEDEEIGEEHDCCVCMVKHRCLGFEPCGHFFCRMCSRELTLSKGNCPLCNNFVLEILEVF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1701 258 SUPERFAMILY RING/U-box 201 254 - -
Mibi04g1701 258 CDD RING-HC 210 247 - -
Mibi04g1701 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 258 IPR013083 -
Mibi04g1701 258 MobiDBLite consensus disorder prediction 173 199 - -
Mibi04g1701 258 MobiDBLite consensus disorder prediction 61 77 - -
Mibi04g1701 258 MobiDBLite consensus disorder prediction 61 109 - -
Mibi04g1701 258 ProSiteProfiles Zinc finger RING-type profile. 210 248 IPR001841 -
Mibi04g1701 258 MobiDBLite consensus disorder prediction 179 199 - -
Mibi04g1701 258 Pfam Zinc finger, C3HC4 type (RING finger) 207 250 - -
Mibi04g1701 258 MobiDBLite consensus disorder prediction 1 37 - -
Mibi04g1701 258 PANTHER OS01G0917900 PROTEIN 45 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1701 Mibi-ChrMibi04 45252436 45253212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1701 157 258 C3H Transcription Factor Family AT3G07120 56.311 3.51e-29 111