Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1691 ATGGCTGTTCCAAAAGTAGACAAAAAGATGCTTGAAGAACTTGAAACAATGGGATTTCCAAAGGCAAGGGCAACTCGGGCACTCCATTTTTCTGGAAATACTAACGTAGAGGATGCTATAAATTGGATTGTTGAACATGAGACTGATCCTGATATTGATGAAATTCCATTGGTAGACGTAGATATTGAGATTGATTCTTCTCAATCATTCCCTATAACAGAAGAAATGAAAGTCAAAGCACAGAAGCTAAGGAAGAATGGTTCTCCTCATTCATCCTCTATTACAGAAGAATCACAAATCAAAGCACAGAAGCTAAGGGAACAATTGCATAAGATGAAAGAAGAGACAGAAAAGAAATTGGAGATAGAAAGGGAAAAGGAGAGAATCCAAGCAGGTAAGAAACTCAATGAGATGAGGCGAATCGCTGAAGAAAATGAAAGGCAACGACATATAGCCTTAAGGAAAGCAGAGAAAGAAGAAGAGAAAAGAGCAAGGGAAAAGGTCATACAGAAACTAGAACAGGATAAGATAAACAGAAGGTCTAAACTTGGGCTTCCCTTAGAAGGCCATGCTAACGTGAAATCTTCAGTTATAACAGTGCAGAAAGAAGAGAATCCAAAGCCTGTTTACACTGTTACAAAAGTTGAGCTCTTGAGAGAATGTTTGAGATCCCTCAAGCGTAACCATCAGGATGAGCATGCAAGAGTCCGAAGGGCCTTTGATACACTCTTAATTTATGTTAGGAATGTTGTTAAGAATCCCAACCAGGAAAAATACAGGAAGATACGATTAGGCAACCCATTATTCATGGATAGAGTTGGGAGTTTGAATGGAGGTGTGGAATTTCTTGAACTATGTGGGTTTGAGAGAACGGGTGACTTTTTGTATCTTCCAGAGGAAAAGGTGGACATAACACTACTAAATTCAGCTGGTTTGGTGTTAAAGTCTGCTATTACAAATCCCTTCTTTGGGCTTTTTAGTACTCGGACATTGTTATAA 999 0.3884 MAVPKVDKKMLEELETMGFPKARATRALHFSGNTNVEDAINWIVEHETDPDIDEIPLVDVDIEIDSSQSFPITEEMKVKAQKLRKNGSPHSSSITEESQIKAQKLREQLHKMKEETEKKLEIEREKERIQAGKKLNEMRRIAEENERQRHIALRKAEKEEEKRAREKVIQKLEQDKINRRSKLGLPLEGHANVKSSVITVQKEENPKPVYTVTKVELLRECLRSLKRNHQDEHARVRRAFDTLLIYVRNVVKNPNQEKYRKIRLGNPLFMDRVGSLNGGVEFLELCGFERTGDFLYLPEEKVDITLLNSAGLVLKSAITNPFFGLFSTRTLL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1691 332 CDD UBA_PUB_plant 6 53 - -
Mibi04g1691 332 PANTHER F13M7.16 PROTEIN 88 325 - -
Mibi04g1691 332 Pfam UBA/TS-N domain 7 43 IPR015940 -
Mibi04g1691 332 Coils Coil 95 132 - -
Mibi04g1691 332 SMART PGNneu 238 299 - -
Mibi04g1691 332 SMART uba_6 7 45 IPR015940 -
Mibi04g1691 332 Gene3D - 219 316 - -
Mibi04g1691 332 SUPERFAMILY PUG domain-like 209 322 IPR036339 -
Mibi04g1691 332 SUPERFAMILY UBA-like 5 56 IPR009060 GO:0005515
Mibi04g1691 332 Coils Coil 142 178 - -
Mibi04g1691 332 Pfam PUB domain 235 303 IPR018997 -
Mibi04g1691 332 Gene3D - 7 53 - -
Mibi04g1691 332 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1691 Mibi-ChrMibi04 45174491 45177976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1691 1 326 C2H2 Transcription Factor Family AT1G04850 54.683 2.14e-93 279