Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1689 ATGTATGCTGATCGGGTAGATACTGGAGCAAGGAGGTCAGTAAAGGAACGTCTTAATGGCAATTTTTCTAGTGACTCCACCCGCCCAAGGCAAATCACTGGAAAGAGGCAGAGACAAGATGACAAATGGGAGCATGATCTCTTTGAGGGTGATGAACCACGAGTTTCTAAACGCCAAGTTGGCGGTCAAGATCTCCGCCTGAAGCTTCAGAGAAAGGGCCTTCAACCAGCTCAGAGTGGAAAGAAATCTGTTCCAGGCATGCGTGATCTACGTGAAAAGTTATCAGGGACGATGACTCAACAGCCTAAAAACTCGGATCCACCAAAGTCGAAAGTGGAAGTTGTTAAACCAAGCAGTAAAAGTGTCATTGTTGAGGCTCTTGTGCCACAAACTAAAAGAGCAGCTAACCCAGCTCCCAAAAAGAAGACATCACAAAAGGCTGGTCCCTCAGTGGATGAATTTTTGCATTCCCTGGGTCTTGAGAAGTATCTCATAACTTTTCAAGCTGAAGAAGTTGATATGACAGCTCTCATGCACATGACTGATGACGATCTCAAGGTTATGGGTATACCAATGGGGCCAAGGAAGAAGATACTTTTAGCTTTAGAGTCAAAGGGTTGA 621 0.4509 MYADRVDTGARRSVKERLNGNFSSDSTRPRQITGKRQRQDDKWEHDLFEGDEPRVSKRQVGGQDLRLKLQRKGLQPAQSGKKSVPGMRDLREKLSGTMTQQPKNSDPPKSKVEVVKPSSKSVIVEALVPQTKRAANPAPKKKTSQKAGPSVDEFLHSLGLEKYLITFQAEEVDMTALMHMTDDDLKVMGIPMGPRKKILLALESKG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1689 206 PANTHER SCP160 103 202 - -
Mibi04g1689 206 MobiDBLite consensus disorder prediction 31 65 - -
Mibi04g1689 206 Pfam SAM domain (Sterile alpha motif) 150 203 IPR001660 GO:0005515
Mibi04g1689 206 MobiDBLite consensus disorder prediction 1 87 - -
Mibi04g1689 206 ProSiteProfiles SAM domain profile. 146 200 IPR001660 GO:0005515
Mibi04g1689 206 Gene3D - 149 206 IPR013761 -
Mibi04g1689 206 CDD SAM_superfamily 150 203 - -
Mibi04g1689 206 FunFam Sterile alpha motif domain-containing protein 148 206 - -
Mibi04g1689 206 SUPERFAMILY SAM/Pointed domain 148 203 IPR013761 -
Mibi04g1689 206 SMART SAM_4 143 206 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1689 Mibi-ChrMibi04 45146585 45150727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1689 37 205 Glycosyltransferase AT3G07170 64.497 6.20e-69 207