Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1685 ATGAGCACTCAAGCAGTCAGGGGGCCTGGTCTCAGAAGTGCTCGAAGGAGGAAGTCAGTTTTGAACTTGGACCTGAACTGTTTCCCACCAGGTGAGAATCAGGAACAGGGGGGACCCTCTACTCAACGTGTGCCTCAAGAAGTTCAAGCTGACCAGCAACTGCCAGTTGCACAACCTGTGATGATTGATGTGGAGGCCATTGAAGACGATGACGTTGTTGAATCCAGTCCCAGGGCTTTTGCTGAGGCTAAAAACAATTTGAGAAGACATCGTAGGAGGACTATAGTTGATGTGGATTTAGAAGAGCGGGCTGGAGGAATCAATAATGGTTGCAACAAACGCAGAAGAAGTTCCTCAAACCAAACAATTATTAACTGTGATCTTTATGTAAACCTTGAAACTAGTAACAGTTCTATGACGGAAAGCACAAGAATGCCACCTGAACCTCCAGTGACTCCTGCCTTTAACTGCCCAATATGTATGGGCCCATTAGTTGAAGAAATGTCAACAAGGTGTGGTCATATTTTTTGCAACAATTGCATTAGGTCTGCAATGAAAGTGCAAAGTAAATGCCCCACCTGCAGGAAAAAGGTTACTGTGAAAGAGCTTAGAAGGGTGTTTCTGCCAGCAACTAGTTGA 639 0.4507 MSTQAVRGPGLRSARRRKSVLNLDLNCFPPGENQEQGGPSTQRVPQEVQADQQLPVAQPVMIDVEAIEDDDVVESSPRAFAEAKNNLRRHRRRTIVDVDLEERAGGINNGCNKRRRSSSNQTIINCDLYVNLETSNSSMTESTRMPPEPPVTPAFNCPICMGPLVEEMSTRCGHIFCNNCIRSAMKVQSKCPTCRKKVTVKELRRVFLPATS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1685 212 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Mibi04g1685 212 SMART ring_2 157 194 IPR001841 -
Mibi04g1685 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 211 IPR013083 -
Mibi04g1685 212 PANTHER ELFLESS, ISOFORM B 2 212 - -
Mibi04g1685 212 MobiDBLite consensus disorder prediction 25 45 - -
Mibi04g1685 212 ProSiteProfiles Zinc finger RING-type profile. 157 195 IPR001841 -
Mibi04g1685 212 Pfam Zinc finger, C3HC4 type (RING finger) 156 194 - -
Mibi04g1685 212 SUPERFAMILY RING/U-box 156 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1685 Mibi-ChrMibi04 45109576 45114431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1685 1 211 C3H Transcription Factor Family AT5G48655 49.537 5.97e-48 154