Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1681 ATGGGTGTGTCATCTGGCTCCAACATCAACCAGCAATCTTCGTCTTCTTCTAAGATGCTGCCTCCACGTCAGCAATCGCGTGTTGGTGGTGGACTGCAAACTTCGCTATCGCTGGTTTCTTCTGATCCTCGTCTCTCTCCTGAGGAACCCAGATCAAATAGTGACAATATTCGAGAATCTCCTACTGAAAGTGCTAGCTCACGAGAAACTTGGCCCACCCCTGATGCTATTGTTGCAGGAAAGAAGATGGATAATGGGAAGGCTGAGAATGATTTCCCTGAGCAGTCTGTCATCCGTCGTGTTTCTGATAGGATCACTCTTCAGGACATTGGTAGAGAAAGGGTTGACATGATCTCTGAAAAGATGCATCATCTACCTGATGAGTTTTTAGAGGAGCTGAAGAACAGTCTTCGAGCGATCCTTGAGGGAGGGAATGGTTCACAGCATAGGGAGGAATTCTTCACTTTGCAGAGGCTTGTTCAGAGTAGAACTGATTTAACAGCCAAGACATTGATTAGAGCACATCGTGTGCAGCTTGAGATCCTTGTTGCTATTAATACTGGAATTCAGGCATTTTTGCATCCCAACATCAGTCTTTCACAAACTTCCCTCATTGAGATCTTCGTGTACAAGAGATGCAGAAATATAGCTTGTCAAAACATGCTTCCTGCTGATGACTGTACCTGTGAAATATGCGCCAACAGAAATGGTTTCTGCAATCTCTGCATGTGTGTGATCTGCAACAAGTTTGACTTTGAAGTAAACACGTGCCGCTGGATTGGCTGTGATTTATGCTCTCATTGGACTCATACAGATTGTGCCATTCGTGAACAACTTATTTGCACGGACCCTTCTGCAAAGAGTGGTGTGGGACCAAGTGAAATGGTTTTCAGGTGCCACGCATGCAAGAGGACTTCGGAGCTGTTGGGTTGGGTTAAAGATGTTTTTCAGCATTGTGCGCCATCTTGGGATGGGGAGGCCTTAATGAGGGAACTTGATTTTGTTAGTAGAATCTTTCATGGTAGTAAAGACCCCAGAGGGAGGAAATTGTTCTGGAAATGTGATGATCTGAAGGAGAAAATGAAAAGTGGAATAGTGGAACCAAATGCTGCCTGCAGTGCAATATTGATTTTTTTCCGAGAGCTTGAGGTGGACTCCCCAAAGAGCCTTGAAAATGGAGAAAGTGGGAGGATGATTGCTCCACAGGAGGCATGCCATAGAATTGCTGATGTAGTGCAGGAGGCTATAAGAAAAATGGAAGTAGTAGCTGATGAGAAGATGAAAATGTTCAAGAAGGCTCGCTTGGCTCTCGATGCTTGTGACCGAGAATTAGCAGATAAGGCGAGGGAAGCAGCTGAACTCAAGATGGAAAGGCAAAAAAAGAAATTACAGATAGAAGAACTGGAGAGAATTGTAAGGCTTAAAACAGCAGAGGCTGACATGTTCCAGCTTAAGGCTAATGAGGCTAAACGAGAGGCAGAGAGGCTTCAGAGAATCGCTCTTGCCAAATCGGATAAATCAGAGGAAGAATATACTAGCAACTACTTGAAACAACGATTAAGTGAGGCCGAAGCTGAGAAGCAATATCTCTACGAGAAGATCAAATTGCAGGAGAGTTCACGTGCTTCGCAGAGTAGTAGCGGTGACCCATCTCAGATGCTGATGTATTCCAAAATCCATGAGCTGCTCTATAGTAGTGTACCTCCCAAGGCAGATGGTCAGCCTAATGAGCGTCACCCATTCCGAACAAATCCATGA 1758 0.4488 MGVSSGSNINQQSSSSSKMLPPRQQSRVGGGLQTSLSLVSSDPRLSPEEPRSNSDNIRESPTESASSRETWPTPDAIVAGKKMDNGKAENDFPEQSVIRRVSDRITLQDIGRERVDMISEKMHHLPDEFLEELKNSLRAILEGGNGSQHREEFFTLQRLVQSRTDLTAKTLIRAHRVQLEILVAINTGIQAFLHPNISLSQTSLIEIFVYKRCRNIACQNMLPADDCTCEICANRNGFCNLCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIREQLICTDPSAKSGVGPSEMVFRCHACKRTSELLGWVKDVFQHCAPSWDGEALMRELDFVSRIFHGSKDPRGRKLFWKCDDLKEKMKSGIVEPNAACSAILIFFRELEVDSPKSLENGESGRMIAPQEACHRIADVVQEAIRKMEVVADEKMKMFKKARLALDACDRELADKAREAAELKMERQKKKLQIEELERIVRLKTAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQRLSEAEAEKQYLYEKIKLQESSRASQSSSGDPSQMLMYSKIHELLYSSVPPKADGQPNERHPFRTNP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1681 585 MobiDBLite consensus disorder prediction 565 585 - -
Mibi04g1681 585 SMART PHD_3 243 303 IPR001965 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 250 270 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 121 143 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 505 527 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 204 225 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 466 486 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 163 178 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 178 193 IPR004082 -
Mibi04g1681 585 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 323 342 IPR004082 -
Mibi04g1681 585 Coils Coil 437 506 - -
Mibi04g1681 585 Pfam PHD - plant homeodomain finger protein 213 336 IPR032881 -
Mibi04g1681 585 MobiDBLite consensus disorder prediction 1 91 - -
Mibi04g1681 585 Pfam Coiled-coil region of Oberon 431 563 IPR032535 -
Mibi04g1681 585 MobiDBLite consensus disorder prediction 57 71 - -
Mibi04g1681 585 CDD PHD_OBE1_like 243 302 - -
Mibi04g1681 585 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 26 564 IPR004082 -
Mibi04g1681 585 PIRSF UCP025218 8 569 IPR004082 -
Mibi04g1681 585 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1681 Mibi-ChrMibi04 45085832 45088057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1681 213 315 PHD Gene Family AT5G57380 31.132 2.72e-09 58.2