Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1667 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGTCAACCAGCAAACACTAAGCTGTCAAGCAACAAGACAGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACGGGAAATTACTCTTGGGGTAGTGAAGCCGTGACCCGCAAGACACGTATATTAGATGTGGTTTACAATGCCTCAAACAACGAGCTTGTTCGAACTCAAACACTTGTGAAGAGTGCGATTGTGCAAGTTGATGCGGCTCCATTTAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGCAGGAAGAAGAAAACAGCTGCCAAGAAGGATTCTACAGAGGAGGGTGAAGCTGCTGCTGCTGAAGAGACAAAGAAAAGTAATCACGTGCTTAGAAAACTAGAGAAGCGTCAGAAAGACAGAAAGCTTGATGCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTGTTGGCCTGCATTTCTTCTCGACCTGGTCAATGTGGCAGAGCTGATGGCTACATATTGGAAGGCAAGGAGTTGGAGTTCTACATGAAGAAAATCCAGAGGAAGAAGGGCAAGGGTGCCGCTTGA 657 0.4718 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKDSTEEGEAAAAEETKKSNHVLRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1667 218 MobiDBLite consensus disorder prediction 1 40 - -
Mibi04g1667 218 FunFam 40S ribosomal protein S8 162 215 - -
Mibi04g1667 218 FunFam 40S ribosomal protein S8 109 176 - -
Mibi04g1667 218 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
Mibi04g1667 218 MobiDBLite consensus disorder prediction 11 26 - -
Mibi04g1667 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Mibi04g1667 218 Gene3D - 26 213 - -
Mibi04g1667 218 FunFam 40S ribosomal protein S8 32 161 - -
Mibi04g1667 218 CDD Ribosomal_S8e_like 5 197 - -
Mibi04g1667 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Mibi04g1667 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mibi04g1667 218 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1667 Mibi-ChrMibi04 44879586 44881799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1667 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.437 1.69e-128 359