Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1664 ATGGACAACGAATTCTTCCTCAATGCTGCTTCCCTTCACTTCGAACCTTCTTCTTCTTCCTCAATGCTCACCTGGCATCAATCCCTCCCGTCCGCCATGGATGTTCAAATTCAAGCTCCTATACTCAATTGCGCTTCCGAACAGCCCCAAGATTGCTTTTTGAACAACCCCAAATGGGATAATAAGTCAACGGATCATCATCACGGTCTTCAATTTGATTCTGCTCTGAGCTCAATGGTTTCTTCACCAGCGGCGTCCAATTCCAATGTTATGGCCAACAATGAGAATTTCATGATCAGGGAATTGATAGGGAAATTGGGAAACATTGGTGGTGGTTCTTCTTTCATTAATGGTGGAAATAGTACTGATAATTCGTGTTATAGCACTCCCTTGAGCTCACCTCCGAAGATGAACTTGATGAATCAGATGGTGAAAGAGAACTTGCCAAGTTTAGGGAAATCTATGATGGTTTTGAATTCTGATGTTGCGGAATTCTCATCTGATCCTGGTTTTGCAGAGAGGGCTGCTAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGGACATACCAATTGGGGATGAATAATGGTCAATTGTCTCTGAGATCTAGTCCTTCAATGGAGAATGAGAAGCTTGCTCGTGTTTCTAGCAGTCCTGTTCTGAAAGCACTTGGTGGATCTCAGATGGAAGTGGCGAATTCCCAAGAGGAATCAACAATCTCTGAGCAAACCCCAAATGGGGAAAATGTGGTGAATCCTAAATCAAGGAAAAGGAAAGCATCTTCCAAGGGAAATAACACCAGAGAAGCTTCAACTCCAAAGGCTAATGAAACAAATGAAGATTCTAATAATTGTAAGCGCAGCAAGCAAAACGAGGATGATGGGAATGAAAATGGAAGTGTGAAGGTAGAGGAAGATTCAAAGGGAGGTTCTAGTAATAATGGAGGAGATGAGAAACAGACCAAGAGCAACTCATCAAAACCTCCTGAACCTCCAAAAGATTACATTCATGTTAGAGCAAGAAGAGGCCAAGCCACCGATAGCCACAGTCTTGCAGAAAGAGTCCGTAGGGAAAAGATCAGTGAGAGGATGAAGCTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGTAAAGCACTTATGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTTTTATCTATGAAACTGGCTTCTGTCAACACCAGGCTGGACTTCAACATTGACAATCTAATCTCAAAAGATATGCTTCAATCAAATAACCCTTTGGCACACCCAATATTCCCTCTAGATTCCTCAGCACAAGCTTTTTATGGGCAACACACTCAGCAAAACCCAGGAATCCACAATAACATTCTTAATGGTGTTGTGTCCCACAGCACAGTAGACCCTTTAGAGACTGCTCTGTGCCAAAACATGGGCATACAATTACCTCCACTTAATGGCTTCCACGAAGGTAGTTCTCAGTTTCCAGTAGCTTTCTGTGAGGATGACCTTAACACCATTGTTCAAATGGGATTTGTCCAAAGTGGAGCTGGAAAATCACCCAGTCATTCCCAGAACTTCAACGGTTCAAATCAAGTCACCCATCTGAAAGTTGAACCTTAA 1635 0.4269 MDNEFFLNAASLHFEPSSSSSMLTWHQSLPSAMDVQIQAPILNCASEQPQDCFLNNPKWDNKSTDHHHGLQFDSALSSMVSSPAASNSNVMANNENFMIRELIGKLGNIGGGSSFINGGNSTDNSCYSTPLSSPPKMNLMNQMVKENLPSLGKSMMVLNSDVAEFSSDPGFAERAAKFSCFGSRSFNGRTYQLGMNNGQLSLRSSPSMENEKLARVSSSPVLKALGGSQMEVANSQEESTISEQTPNGENVVNPKSRKRKASSKGNNTREASTPKANETNEDSNNCKRSKQNEDDGNENGSVKVEEDSKGGSSNNGGDEKQTKSNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNIDNLISKDMLQSNNPLAHPIFPLDSSAQAFYGQHTQQNPGIHNNILNGVVSHSTVDPLETALCQNMGIQLPPLNGFHEGSSQFPVAFCEDDLNTIVQMGFVQSGAGKSPSHSQNFNGSNQVTHLKVEP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1664 544 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Mibi04g1664 544 SMART finulus 351 401 IPR011598 GO:0046983
Mibi04g1664 544 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 414 IPR036638 GO:0046983
Mibi04g1664 544 Coils Coil 392 412 - -
Mibi04g1664 544 Pfam Helix-loop-helix DNA-binding domain 349 396 IPR011598 GO:0046983
Mibi04g1664 544 MobiDBLite consensus disorder prediction 306 329 - -
Mibi04g1664 544 FunFam Basic helix-loop-helix transcription factor 342 414 - -
Mibi04g1664 544 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 239 448 IPR024097 GO:0006355
Mibi04g1664 544 CDD bHLH_AtBPE_like 335 420 - -
Mibi04g1664 544 MobiDBLite consensus disorder prediction 281 305 - -
Mibi04g1664 544 MobiDBLite consensus disorder prediction 520 544 - -
Mibi04g1664 544 MobiDBLite consensus disorder prediction 229 252 - -
Mibi04g1664 544 MobiDBLite consensus disorder prediction 266 280 - -
Mibi04g1664 544 MobiDBLite consensus disorder prediction 229 336 - -
Mibi04g1664 544 Gene3D - 342 417 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1664 Mibi-ChrMibi04 44821722 44824264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1664 1 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 47.151 6.01e-119 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g1664 HLH 4.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0560 11 11468907 11471578 Mibi04g1664 04 44821722 44824264 CCT