Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1578 ATGGGAGGTATTGGCAAGACAACTATTGCCAAAGCCATTTATAATGAAATTGGTCGTAAATTTAAAGCAAGAAGTTTCATAGCAAATATACGAGAAAATTCAAAGCATGATAATGACTTGATGAATTTGCAAAAGCAACTCATTTCTGATATCACTAAAACACAAGTTTTCAAGGTATCAAATATTGATAGAGGGAAAAAAATAATTCAAGAAAGATTTCCCAACATAAAAGCACTTATCATATTAGATGATGTGGACAATGTCAACCAGCTAGATGCATTATGTGGAAGTCATGAATGGTTTTGTCCAGGGAGTGTACTTATCGTAACGACTAGAGATCTTCGTTTGCTTAATGTCCTCAGGGCAGACTACAAGGATAAAATAAGAGAAATGAATGAAGTAGAGTCTCTCAAGCTCTTCAGTTTGCACGCCTTTAAGGAAGAAACCCCTTTTACCATAGAGACCAAAGAACAGCCTTTCAGTTCACACACCTTTAAGGAAGAAATACCTTTTAGTGAAGACATAATAGAACTCTTTAAAAAGGAAGAACTGTCTAAAAAGGTGGAACTGTCTAAAAAGGTAGTTGCTTACTGTGGTGGACTTCCATTGGCTCTTGAAGTTATTGGCTCTTTTTTGTTTGATAGAGAAATTGAAGAATGGGAGGATGTGTTGTCCAAACTAGAAAAAATCCCGAATGATGAGATACAAGCAAAGTTGAGATTAAGTTTTGATGGTTTAAGGGATGATATGGAGAAGAATATATTTCTTGACATATGTTGCTTCTTTATCAACAAGGATAGAAACTATGTGACACAAATATTAAATGGATGTGGATTTAATGCAAAAATTGGAATGACTACCCTCATTGAGAGAAGCCTAATATATGTTAATAAGCATAACAAGATTGAAATACATGACTTATTACGTGATATGGGAAGAGAAATCATTTGTGGAAGCCCAAGAAAGGATCCTGAGGATCGTAGTAGATTGTGGTTTCATGAAGATGTGATTGAAGTGTTGACAAAAAATATTGTAAGTCTTTCTTCCATGTCCTATTTTCATCTGCCATCTTTGATGTCAAAGGATGCATTTGTTTTTTCTTCATGA 1107 0.3451 MGGIGKTTIAKAIYNEIGRKFKARSFIANIRENSKHDNDLMNLQKQLISDITKTQVFKVSNIDRGKKIIQERFPNIKALIILDDVDNVNQLDALCGSHEWFCPGSVLIVTTRDLRLLNVLRADYKDKIREMNEVESLKLFSLHAFKEETPFTIETKEQPFSSHTFKEEIPFSEDIIELFKKEELSKKVELSKKVVAYCGGLPLALEVIGSFLFDREIEEWEDVLSKLEKIPNDEIQAKLRLSFDGLRDDMEKNIFLDICCFFINKDRNYVTQILNGCGFNAKIGMTTLIERSLIYVNKHNKIEIHDLLRDMGREIICGSPRKDPEDRSRLWFHEDVIEVLTKNIVSLSSMSYFHLPSLMSKDAFVFSS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1578 368 Pfam NB-ARC domain 1 232 IPR002182 GO:0043531
Mibi04g1578 368 PRINTS Disease resistance protein signature 198 212 - -
Mibi04g1578 368 PRINTS Disease resistance protein signature 72 86 - -
Mibi04g1578 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 154 IPR027417 -
Mibi04g1578 368 Coils Coil 117 137 - -
Mibi04g1578 368 Gene3D - 1 126 IPR027417 -
Mibi04g1578 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 258 IPR027417 -
Mibi04g1578 368 Gene3D - 171 247 IPR042197 -
Mibi04g1578 368 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 343 IPR044974 GO:0006952
Mibi04g1578 368 SUPERFAMILY "Winged helix" DNA-binding domain 233 340 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1578 Mibi-ChrMibi04 42870351 42871457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1578 1 331 WRKY Transcription Factor Family AT5G45050 31.437 3.83e-43 158