Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1566 ATGACTTCATTCGTGAAGCCTGATAATGCTTTGAAAAGGGCGGAAGAATTGATCAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTTCATGGCCTTATCACTTCAAAAAGATATAGGGCGTGGCAAAAGACACTTGAAAGGATAATGTTTAAATACGTAGAACTGTGTGTTGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTCATTCAGTATCGAATTATGTGCCAACAAGTTAATGTTAGTTCACTGGAGGAGGTGATCAAGCATTTTATGCATCTGTCAACTGAGAAAGCTGAACAAGCTCGCAGCCAGGCACAGGCCTTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCGGAGGATCTTATGCTTAGCTATGTTAGTGGGGAGAAAGGTAAAGACAGATCTGACAGGGAGCTTGTTACACCGTGGTTTAAATTTCTTTGGGAAACATACAGGACTGTGCTTGAGATACTACGGAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCGCATCGGGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACTGAGTTCCGTAGACTTTGTGAAATTATAAGAAACCATCTAGCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCTTGCAACTGTATCTTGATACCAGGTTTGAGCAACTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGACATACATGGACTAATGTGCATTGTCAAGAAAACACCCAAGTCATCGTTGATGGTTGTATACTATGCTAAACTTACAGAAATATTTTGGATATCATCAAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGCCAGAAGGATCTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAATTTGAGAATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATGGCAGAGAAGTGCTTTCAAGATCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTTATGTCTTGTGCAACTCAGGAAGTGAAGGACATCTATCATCTCCTGGAACATGAATTTCTTCCCCTTGATCTTCCATCAAAAGTTCAGCCTCTGCTAATCAAAATATCAAATTTAGGGGGTAAGCTCTCCTCTGCTTCTTCTGTCCCTGAGGTGCAGATGTCTCAGTATGTCCCCGCACTGGAGAAACTAGCTACCCTGAGGTTGCTACAGCAGGTGTCCAATGTATACCAGACAATGAGGATTGAGACCTTATCTGGAATGATCCCCTTTTTTGATTTCTCTGTTGTGGAAAAGATTTCTGTGGATGCTGCTAAGCACAATTTTGTATCTATGAAAGTTGACCACATGAGGGGTGTTGTAGTTTTCTGTAGAACGAGTCTAGAGTCTGATGGCTTACGGGACCACCTGGCTAATTTTGCTGAATATCTGAATAAAGCAAGACAGATGATTTTCCCTCCTGATAGAAAGTCATCAAAAATTGGAGCTTTGCTTCCCACTTTGAATGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTCGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAGAGACAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAGAGATTAAGACTGCAGAAGATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAAGCATTGCTTCAGGAAGCTGAGAAGCGCATTAAAAAGAAGGGAAAGAAGCCGATCATAGAGGGTGAAAAAATGACCAAGCAAACACTGATGGAGTTGACTTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAAAAGAAACTACAAAAACTAGCTAAAACAATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAACAGCGGCTTGTTGAAGAGAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGTGATCTCAAGGAGAAGGAAAGACTGTCTCGTATGGTTGGCAATAAGGAGATTTATCAAGAGAGGGTTGTCAGTCGTCGTCAGGCAGAATTTAATAGACTGAGGAGGGAAAGAGAGGAGCGAATTTCGAGGATTTTACAGTCCAGGAGGCAAGAGAGGGAAAAGACGAGGAAGTTGAAGTATTATCTGATGTTAGAAGAAGAGAGACAGCAGAAATTGCGTGAAGAAGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCGGTTAGCGAAATTGGCTGAGATAGCAGAAAAGCAGAGGCAAAGAGAGCTGGAACTTGAAGAGAAGGCGGAGAGGCAGAAGAAAGAAGCACTGCTTGGCAGAAGTGTTGAAGCAGCTGTGAAGCCTCTTGAACCTGCTGCCCTCCCATTAGAGGCTGGATCTGTCTCTCCTGCAGCTCCTGCTGCAGCAGCAGCACCAACTGCAGCTACACCAGGCCCCGCAAAATACGTTCCTAGGTTCCGGCGTGAGAGACCTGATGGACCAAGCCCTGCCGCTCCTCCAGAAACTGAACGATGGACAAACTCTGGCAGGCAGGATGGTGGTGGTGACAGATGGCGTAGTGATGATCGAAGACCTGCTTTTGGTTCTGGTGGGGGTTCAAGGTCGTCATCAACTTGGTCCTCATCCAGGCGTGGGTCTGATCGTTGA 2913 0.4422 MTSFVKPDNALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIMCQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFNLESKPDGREVLSRSALLAELVSKGVMSCATQEVKDIYHLLEHEFLPLDLPSKVQPLLIKISNLGGKLSSASSVPEVQMSQYVPALEKLATLRLLQQVSNVYQTMRIETLSGMIPFFDFSVVEKISVDAAKHNFVSMKVDHMRGVVVFCRTSLESDGLRDHLANFAEYLNKARQMIFPPDRKSSKIGALLPTLNEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEEKLLHEREQQLEIEVSKQCHEGDLKEKERLSRMVGNKEIYQERVVSRRQAEFNRLRREREERISRILQSRRQEREKTRKLKYYLMLEEERQQKLREEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRELELEEKAERQKKEALLGRSVEAAVKPLEPAALPLEAGSVSPAAPAAAAAPTAATPGPAKYVPRFRRERPDGPSPAAPPETERWTNSGRQDGGGDRWRSDDRRPAFGSGGGSRSSSTWSSSRRGSDR 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1566 970 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Mibi04g1566 970 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Mibi04g1566 970 MobiDBLite consensus disorder prediction 952 970 - -
Mibi04g1566 970 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Mibi04g1566 970 Pfam PCI domain 373 508 IPR000717 -
Mibi04g1566 970 MobiDBLite consensus disorder prediction 841 867 - -
Mibi04g1566 970 Coils Coil 93 120 - -
Mibi04g1566 970 MobiDBLite consensus disorder prediction 841 862 - -
Mibi04g1566 970 Coils Coil 667 697 - -
Mibi04g1566 970 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 970 IPR027512 GO:0005852
Mibi04g1566 970 Coils Coil 615 649 - -
Mibi04g1566 970 Gene3D - 268 342 - -
Mibi04g1566 970 Gene3D - 362 493 - -
Mibi04g1566 970 MobiDBLite consensus disorder prediction 883 970 - -
Mibi04g1566 970 MobiDBLite consensus disorder prediction 806 827 - -
Mibi04g1566 970 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Mibi04g1566 970 Coils Coil 561 602 - -
Mibi04g1566 970 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Mibi04g1566 970 SMART PINT_4 441 532 IPR000717 -
Mibi04g1566 970 Gene3D UVR domain 217 267 - -
Mibi04g1566 970 Coils Coil 796 857 - -
Mibi04g1566 970 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 959 IPR027512 GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1566 1 969 Eukaryotic Initiation Factors Gene Family AT4G11420 72.533 0.0 1334