Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1546 ATGTTTGGTGAAGTCATTCCAAACAAAGCAATACTTGAGGCTTTCGGTAATAACGTACAAGTCAAAGTGGAAAAGATCGGAAAGAGATTGTATTTCAGTAATGGGTGGAGTGACTTTGTGAAAGCTTATAACTTGGAGCTAGGTGACTTCTTACTCTTCAAATATTTCCCAGATCATTCAAAGTTTAAGGTTACAATCTATGGGAAAACATGCTGTGTGAAGGAGTTCAATAATAGTAAAAAAGATCCTAGAAATGTAATAGAAGGAAGTAACAGAAAGGTGCAGGTTGACAATGAAGGATTCATAGAAGCAAAACGCATAAAAAGTGAATTTGATTCAACCGAAGTAATCAACATCGATTCTGATTCTTCTTCTGATGATGCTAATGAAACTGGTAAACTTCACTGA 408 0.3529 MFGEVIPNKAILEAFGNNVQVKVEKIGKRLYFSNGWSDFVKAYNLELGDFLLFKYFPDHSKFKVTIYGKTCCVKEFNNSKKDPRNVIEGSNRKVQVDNEGFIEAKRIKSEFDSTEVINIDSDSSSDDANETGKLH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1546 135 Pfam B3 DNA binding domain 16 67 IPR003340 GO:0003677
Mibi04g1546 135 PANTHER B3 DOMAIN-CONTAINING 6 91 - -
Mibi04g1546 135 Gene3D - 1 72 IPR015300 -
Mibi04g1546 135 SUPERFAMILY DNA-binding pseudobarrel domain 11 72 IPR015300 -
Mibi04g1546 135 ProSiteProfiles B3 DNA-binding domain profile. 1 70 IPR003340 GO:0003677
Mibi04g1546 135 CDD B3_DNA 18 67 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1546 Mibi-ChrMibi04 41966013 41966420 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1546 10 72 B3 DNA Binding Superfamily AT4G01580 34.921 2.94e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi04g1546 B3 1.2e-09 CL0405