Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1530 ATGTCAATGTATCCCTTCTTCTTCTTCTTCTTCTTCCTGCCTCAGATTCTTTGTTCAAAACCAGTTCTTTCGTCCGTACGCAGGATCCTCCACGAGCCATTTCAACCATTAGGTTCAGTCCCTCCTCCTCCACCCCCTTCCTCTCCTCCTCCACCTCCTCCAAACGCTAAATACCCATTTTCCACAACTACCCCTAACCAACCCCCATTTTTCCCAACCTACCCTTCACCCCCTCCACCTCCTTCCCCTTCCTCCTTCGCCTCCTTCCCTGCAAACATCTCCTCCCTTATCCTCCCCCACCCCTCCAAATCCAAATCCACCTCCTCAAAACTCCTCGCCGTCGCCCTCGCCGCCGTCGCTCTCGCCATCCTCGCCGCCGCCATCTCCGCCTTCGTCTACTGTCGGCGGAGGCGGCGGAAGAATCGGTACGCCTCTACCGCCGACGAGAAAACCCTCAGATCCGACAGCAGCCTCCGCCTCTTCCCTCCGCCGCCCACCGCCGAATCCGGCAATGCCGGTCGGAAGATTCGGCACACTTCCTCTACCAGCTCTGAGTTCCTCTACCTCGGCACCATCGTCAATTCCCGCGGCGAGGACCGGTCCGGCCCGCGAACAACGACAAACGATGCCGCCCGGGCCGGACGAGGCGGCGGAGGAGGCGGTGGCGGTGTGGACCCTAGAAAAATGGACTCGCCGGAGCTCCGTCCGCTTCCGCCGCTAGCGCGGCAAGGTTCGAGGCAGCAAAGCGGCACGGTGGCGGCGGCACGTGACGAATGGGGATCGAACACGGTGGCGGACGATGAGGAAGAGGAATTTTACTCGCCGAAGGGGTCTTTGAATGGTAATGAGAGTTCAATTGGTACTGGATCAGGTTCTCGTAGGGTTTATGCGGCCATTGGGAGTGAGAATTTTGTTGGTAGAAGCAGTGAATCGAGTTCTAGCTCGTATTCTTCGTCGACTTCGGGCTCGCCGGATCGGTCTCACTCGATTAGCCTATCGCCTCCGGCGAGCTTGAGCCCGAAAAGATCGCAGCCGAAATCGCCGGAAAATGCACCGCCTGTTAATACTCAGTCCGGCGAGGGATCTTTGAGGTCATCATCAGAGAGAAGCCAATTTTCTCAGCATGTTCAGTCTTCTGCAATGTCTTCTTTGTCTTCATCACCTGAGAGAGCTTCTGGTGGAGATGGTAAGTCTCCTTTGCTTTCTCCACTTTCTTTATCGCCAAATAGAGATTCAAGGAAGAACTTAGATGGGGCAGGTGGGACATCAGGTGTCAAATTTGAGAATGTGCATTCTTCTCCTGAGAGATATGTTGAGAGAAAACCAGAATTGTCATCACCAGATAGAAATGCTGAGAAAATTTCAGGATCACCAATGTTATCCACTACTACATCACCTGAAAGGAATGTGAAGAAAATTTCATGTGCCTCATCACCAAAGAGAAATTCTGGGAAAATTTCCCATGAGTCTCCTAGATTATCAACTGGATCATGTGAGGGAGGTGTGGAGGCAGTGTTATGTGCATCATCACCAAGATTATCCAATGCAGCACTAGGGAAAAATGAGAAAATCTTATGTGGGTCACCTAGATTGTCCAATGCTTCCAATCAAAGTGAGAAGTCTGTGTCTTCTTCTTCTTCTTCAGCTTTCTCTCTGCCATCATCACCTGAGAAAGTGGTTGAGCATGGTTTGGAGGATTCTCCAAGTCTATCCAATGTTTCAGAACGTTATAGGCAATCTCCTATGCCAAATCTGCTTTCATCACCAGAAAGAGAATCATACAATAGTCCAGATCATTCTGCTGCAGTTGAAAATGCTCTTGATCAAACCAGAGATTCTCCAGTTTCTACTCCTCCCCCACCACTTCAACCACAGAGAAAACACTGGGAGATTCCCATCCTATCAACACTTTTTGGTCAACCAGCAAGAGTAAATAAAGTAATGGATCAAAATGTAGAATCTCCAGCTCCTCCTGCACCACCACAGAGGAAACATTGGGAGATTCCAGTTTTCTCAACACCCATTGGTCAGCCTAAAGTTTCTCCACCTCCGCCTCCGCCTCCACCTCCACCTCCACCGCCTCCTCCTCCGCCTCCGCCTCAACCGCCCCACCAGCGAACACGAAAGCAATGGGAAATTCCATCTCCTTCAACACCCACTGATCAGTCAGTTTCTACGCCTCCAGAACTAATTCCACCTTCAAGGCCTTTTGTGTTGCCAAGTCCAACAACAGATGTGTCTCCAGTTGAGTTGCCTCCAAATTCTCAACAACAGGATTTGGGGATGAATGAGGAGACTCCAAAACCAAAGTTGAAGCCATTGCATTGGGATAAAGTGAGAGCTAGCTCTGATCGTGAAATGGTCTGGGATCAGTTGAGGTCAAGCTCTTTTAAATTAAACGAGGAAATGATTGAGACATTGTTTGTTGTCAAGACGCCAACTCCTAAACCGAAGGATACTACACCGCGTTCAGTTCTTCCTACACCAAAACAGGAGGACAGAGTGCTTGATCCTAAAAAGTCACAAAATATTGCAATTTTACTGAGGGCACTTAACGTGACTATTGAAGAAGTTTGTGAAGCATTATTAGAAGGTAGTGCCGATACACTTGGAACAGAACTACTCGAAAGTTTATTAAAGATGGCACCAAGCAAGGAAGAAGAACGTAAACTGAAGGAACATAAAGAGGACTCACCAACCAAGCTTGGTCCTGCAGAGAAATTCTTGAAGGCTGTGCTTGATGTACCATTTGCGTTCAAAAGGGTGGAAGCCATGCTCTACATAGCTAATTTTGAGTCTGAAGTGGAGTATCTTAGGAAATCGTTTGGAACTTTAGAGGCTGCTTGTGAGGAGCTCCGCAATAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTTGGGACAAACCGTGGTGATGCACATGCCTTCAAGCTCGATACACTTCTCAAGCTTGTTGACGTCAAAGGTGCGGATGGGAAGACCACCCTACTGCATTTTGTTGTACAGGAAATCATAAGAACCGAAGGTGTGCGTCTCTCAAGTACTTCACAAACTCCGAACTCGTCTTCGAGCGAAGATGCCAAGTGTAGGAGGCTTGGTCTACAAGTTGTTTCCAGTCTGAGTTCAGAGCTAGCAAATGTAAAGAAGGCTGCTGCGATGGATTCCGAGGTTCTTAATGGTGATGTCTCCAAACTTTCTAAAGGAATTTCTTACATAACAGAGGTGGTGAAACTAAATGAAGCAACAAAGCAAGATGAAAGTGGTAAAAAATTTACAGAATCAATGCACAAATTTATGAGGATGGCTGAGGAGGAGATCTTGAGGATTCAAGCCCAAGAAAGTGTTGCTCTCTCCTTAGTGAAGGAGATTACTGAGTATTTCCATGGTAACTTGGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCATGGTGGTGAGAGACTTCTTATCGGTTCTTGACCGAGTCTGCAAAGAAGTTGGTTTAATAAACGAGAGGACAATGGTTAGTTCTGCTCATAGATTTCCGGTTCCTGTAAACCCCTTGCTTCCACAACCCCTAAACCCTATGCTTCCACAACCCTTACCTGGATTATTTGGAAAGAGACAATGCAGCTCCTCAGACGATGATAGTCCCTCCCCATAG 3666 0.4815 MSMYPFFFFFFFLPQILCSKPVLSSVRRILHEPFQPLGSVPPPPPPSSPPPPPPNAKYPFSTTTPNQPPFFPTYPSPPPPPSPSSFASFPANISSLILPHPSKSKSTSSKLLAVALAAVALAILAAAISAFVYCRRRRRKNRYASTADEKTLRSDSSLRLFPPPPTAESGNAGRKIRHTSSTSSEFLYLGTIVNSRGEDRSGPRTTTNDAARAGRGGGGGGGGVDPRKMDSPELRPLPPLARQGSRQQSGTVAAARDEWGSNTVADDEEEEFYSPKGSLNGNESSIGTGSGSRRVYAAIGSENFVGRSSESSSSSYSSSTSGSPDRSHSISLSPPASLSPKRSQPKSPENAPPVNTQSGEGSLRSSSERSQFSQHVQSSAMSSLSSSPERASGGDGKSPLLSPLSLSPNRDSRKNLDGAGGTSGVKFENVHSSPERYVERKPELSSPDRNAEKISGSPMLSTTTSPERNVKKISCASSPKRNSGKISHESPRLSTGSCEGGVEAVLCASSPRLSNAALGKNEKILCGSPRLSNASNQSEKSVSSSSSSAFSLPSSPEKVVEHGLEDSPSLSNVSERYRQSPMPNLLSSPERESYNSPDHSAAVENALDQTRDSPVSTPPPPLQPQRKHWEIPILSTLFGQPARVNKVMDQNVESPAPPAPPQRKHWEIPVFSTPIGQPKVSPPPPPPPPPPPPPPPPPPPQPPHQRTRKQWEIPSPSTPTDQSVSTPPELIPPSRPFVLPSPTTDVSPVELPPNSQQQDLGMNEETPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVKTPTPKPKDTTPRSVLPTPKQEDRVLDPKKSQNIAILLRALNVTIEEVCEALLEGSADTLGTELLESLLKMAPSKEEERKLKEHKEDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFGTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGVRLSSTSQTPNSSSSEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLNGDVSKLSKGISYITEVVKLNEATKQDESGKKFTESMHKFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLSVLDRVCKEVGLINERTMVSSAHRFPVPVNPLLPQPLNPMLPQPLPGLFGKRQCSSSDDDSPSP 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1530 1221 Gene3D Formin, FH2 domain 761 1169 IPR042201 -
Mibi04g1530 1221 Pfam Formin Homology 2 Domain 763 1160 IPR015425 -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 567 613 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 645 770 - -
Mibi04g1530 1221 PANTHER FORMIN-RELATED 466 1204 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mibi04g1530 1221 SUPERFAMILY Formin homology 2 domain (FH2 domain) 690 1172 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 193 291 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 37 83 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 142 180 - -
Mibi04g1530 1221 SMART it6_source 761 1175 IPR015425 -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 304 392 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 748 763 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 708 728 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 303 498 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 277 291 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 450 494 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 526 630 - -
Mibi04g1530 1221 ProSiteProfiles Formin homology-2 (FH2) domain profile. 761 1186 IPR015425 -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 242 256 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 528 554 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 812 834 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 676 705 - -
Mibi04g1530 1221 MobiDBLite consensus disorder prediction 432 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1530 Mibi-ChrMibi04 41571348 41576373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1530 27 348 FH2 protein (formin) Gene Family AT3G25500 43.413 1.84e-24 109