Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1522 ATGGAAGCAACCCTTCCACCAGGGTACAAGTTTAACCCCACAGACCAAGAGCTGATTTGGCATTACTTGTACAAGAAGGTGAATGGCAGACCCCTCCCTTGTAATGCAATTATTGACTGCGACATTTATGGAGGTGACAGTTCCTGGAGGAAGATGTTTGATGATCGGGAAGAGGAATCTCTTTACTTCTTCACCAAATTAAGGAACTGGGGCACCCAAAAAAATGGCTGTTCCTCAAGGGTTATGAGGGCCACAAAGTTTGGCACTTGGAGGGTTCAATCTGATTTGGAAATCTATGCTGGGAAGAAACATGTTGGCTCTAAGAGGACCTTCTCCTTCATTGAGAAGAAGAAGGAAGAAGAAGAGCCCAAGAAAAAAGGATCTAGGAAGACAAATGGTTGGACAATGCATGAGTACAGACTCGATGGCTGTCTTATACATCAAAGTGAACACAGCTCTTCAGATTATGGGTATGTGGTCTCCAGGATCAGCAGGCCAAGATCTATGAGGAGAGATGAAGAAGAATCAATCAGCTCTCAAATTGCGTCTGAGCTGGAAGCTCCATTTCCTGAAGAGCTAAACCAAGACAACAACAAAGGAAAATCAATCAGCTCTGAGATTGAGTGTGAAGGGGATGCCTTATTTCTTGAAGAGCTAAACCAAAACAACAAAGTTGTGGATACCGAGATGCTTCCTGGTTACTCCGTTGAGCTAGAAATAATTGATGAATGGTTTTCATGTGTTCTTGGAAAGACGGAACAAGATGATTTTTCCTTTCCTGGGAATAAATTAGAGAAGTTTACTCTATTGCCAACATTTAGAACTGTGTGTCGCTTAGACTTTGTGAAACTTTATTTCTTTGCCAATGTTTCTTTGGGTATAAACCTTAACCTCATTATTAGACAACACAGAGATGTTATTGCACAAATAGCGTCTTCTGCTAGTATTGCTGGGGACATTGTTCCTGCTGCTTCATATGACCTGAGTTGCATCTCAATGGATTTAAAGTTTAGCAAACTATGCTAA 1026 0.4142 MEATLPPGYKFNPTDQELIWHYLYKKVNGRPLPCNAIIDCDIYGGDSSWRKMFDDREEESLYFFTKLRNWGTQKNGCSSRVMRATKFGTWRVQSDLEIYAGKKHVGSKRTFSFIEKKKEEEEPKKKGSRKTNGWTMHEYRLDGCLIHQSEHSSSDYGYVVSRISRPRSMRRDEEESISSQIASELEAPFPEELNQDNNKGKSISSEIECEGDALFLEELNQNNKVVDTEMLPGYSVELEIIDEWFSCVLGKTEQDDFSFPGNKLEKFTLLPTFRTVCRLDFVKLYFFANVSLGINLNLIIRQHRDVIAQIASSASIAGDIVPAASYDLSCISMDLKFSKLC 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1522 341 Gene3D NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
Mibi04g1522 341 ProSiteProfiles NAC domain profile. 5 166 IPR003441 GO:0003677|GO:0006355
Mibi04g1522 341 PANTHER NAC TRANSCRIPTION FACTOR 56 5 199 - -
Mibi04g1522 341 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
Mibi04g1522 341 MobiDBLite consensus disorder prediction 169 197 - -
Mibi04g1522 341 Pfam No apical meristem (NAM) protein 6 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1522 Mibi-ChrMibi04 41409469 41410727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1522 5 163 NAC Transcription Factor Family AT5G07680 36.250 7.37e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi04g1522 NAM 1.2e-22 No_clan