Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1483 ATGGATCTGGAGAATGGGTCTCGGGATCAGCCGGGACAGGTGTTATTGAGTTTTAGTAGAGGCAAAGACGAAAAAGAACCTGCCGCTTCCTGTGTTGTTCAATGTTTATCATGGTGTGGAGTTATAATTTCCGATCTCCATCTTCAAGATTATATCGCAAATGACCAATTTGAAAGCATTGTTAAAGCTTCTAAAATTGCAATCATCATATTTTCTAAACGTTATGCTAGTTCCAGAAGTTGCCTCGAGGAACTCACCAAAATTATGGACTTTTCCATGGCATATGATCTGGCAGTTCTTCCCATATTTTATGGTGTAAATTCATTTCAAGTTTGTAACCAAGAATCTTCTTTTGGACAAGCATTTCAAGGTCTTATACGAAGAATTTCACCCATTGAAGGTAAAGTGTCAAGGTGGAGGACAGCTCTCAGTGAAGTTAGAGGATGACAAGGATGGCCTAAAGAAGAATTCATTGAACTTAGAAGAAAAGTGGTTGCTTGTAGTGAGGGATTGCCACTAGCTCTTAAAGTTCTCGACTCTTTATTGTCTGAGCGGTCACTGATGGAATGGGAGTTGGTGTTGATGAACCTAAGCACAAATCTCCCTAGTGGCATTTACTACAATCTAAAGCGTAGTTTTGACTCTTTAGATGACAATGGAAAAGAAATATTTTTGAATATGGTTTTATTTTATAATGGGGAGGACATGAATGATGTGATTCAAAAGTTGGAAGGCCATGGATGTGATGCTAGCACTGGGATAAGAGTTTTGGAGGATCGAAGTCTAGTGACCATTGACAAGAATTACAAAATTAGAGTGCATAACATGTTGCAGCTCATGGGAAGAAAAATAATATATGAAAGCTCACAAAATGATGTTCAAAGTCGAGGTAGGTTTTGGTTTTGTGAGGATGCATACATGCACTTCATGCTGGTATTGTCAAACATATGCATGCATGTGGTTCTACCCGTGTTTTACAACGTGAATCCATCAGAGATTCGTAGTCAAACTTCTTGTGTTGGAAAATCGTTTAAAGATCTTATACAAAGAATTTCACCACCAAAAGATCAAATTTCCAAATGGAGTAAAGCCCTAACTGAGGCTGGGGGCACTGCTGGGTTCGTTGTACCTGGTTGCAGGTAA 1143 0.3902 MDLENGSRDQPGQVLLSFSRGKDEKEPAASCVVQCLSWCGVIISDLHLQDYIANDQFESIVKASKIAIIIFSKRYASSRSCLEELTKIMDFSMAYDLAVLPIFYGVNSFQVCNQESSFGQAFQGLIRRISPIEGKVSRWRTALSEVRGXQGWPKEEFIELRRKVVACSEGLPLALKVLDSLLSERSLMEWELVLMNLSTNLPSGIYYNLKRSFDSLDDNGKEIFLNMVLFYNGEDMNDVIQKLEGHGCDASTGIRVLEDRSLVTIDKNYKIRVHNMLQLMGRKIIYESSQNDVQSRGRFWFCEDAYMHFMLVLSNICMHVVLPVFYNVNPSEIRSQTSCVGKSFKDLIQRISPPKDQISKWSKALTEAGGTAGFVVPGCR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1483 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 225 IPR027417 -
Mibi04g1483 380 Gene3D - 222 380 IPR035897 -
Mibi04g1483 380 Gene3D - 3 143 IPR035897 -
Mibi04g1483 380 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 152 IPR035897 -
Mibi04g1483 380 SMART till_3 11 149 IPR000157 GO:0007165
Mibi04g1483 380 SUPERFAMILY Toll/Interleukin receptor TIR domain 301 373 IPR035897 -
Mibi04g1483 380 SUPERFAMILY "Winged helix" DNA-binding domain 205 306 IPR036390 -
Mibi04g1483 380 Gene3D - 144 217 IPR042197 -
Mibi04g1483 380 ProSiteProfiles TIR domain profile. 223 369 IPR000157 GO:0007165
Mibi04g1483 380 Pfam TIR domain 55 159 IPR000157 GO:0007165
Mibi04g1483 380 ProSiteProfiles TIR domain profile. 10 168 IPR000157 GO:0007165
Mibi04g1483 380 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 158 306 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1483 Mibi-ChrMibi04 40394491 40399469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1483 159 300 WRKY Transcription Factor Family AT5G45050 36.364 1.02e-19 89.4