Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1456 ATGGCAACAGCAGATTCATCTCTCGAGGGTCTCACACTTGATCCGGCTAAATGCAGTAAGTTAAGTATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTGGCCAAATGATGCATTGGAAATGCTACAGTCATGGAGCCGTCAAGAAATTTTACAAATTCTTTGTGCTGAGATGGGGAAAGAGAGGAAGTATACTGGATTAACAAAGGTGAAAATTATAGAAAACCTTCTGAAAATTGTTTCTGAAAAGAAATCTGGAGGTCAGGACACTGCAACAGAGGCTGAACCACATTCTTCCACTTCAAATGGCCAGAAGCCTGCTAAAAGGCAGAGGAAAAATGAGAATCCGTCTCGATTACCTCTTTCGCTAAATGATTTTCCTGTCAACAATGGAGTTGGAGATGCAAATAGTATTTCGTACTGCAAGAACACAGCTTGCAAAGCTACCCTAAGTGAAGCAGATGTGTTTTGTAAAAGATGCTCATGCTGCATTTGTCATAAATATGACGACAACAAAGATCCTAGCCTTTGGTTAATATGTGGCTCTGAGCCTCCATTTGTTGGTGTTTCTTGCGGCTTGTCATGTCATCTTGAGTGCGCTTTAAAGCATGATAATTCTGGCATTGGCAAAGATGGAAAACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGTGAATGATTTGCTCGGATGCTGGAGAAAACAACTGACGGTGGCAAAGGATACTAGACGTGTCGACATACTATGCTACCGTGTGTCCTTGAGCCAAAGAATTTTTCAAGGGACTGAAAAATATAAAAAAATTTATGAACTTGTTAATGAGGCGGTGAGGAAACTTGAACCGGAATTAGGGCCGCTAACTGGTTCACCAGTGAAGATTGGTAGGGGCATTGTGAACAGACTTTCATCGGGGCCAGAGGTTCAGAAACTCTGTGGTTTGGCTTTGGAATCATTAGATTCTCTTCTTTCTAAAAGGGTTAGGTCTCCATCACCTGATCCAACAATTCAAGATGCAAATTTGATTGCTTCAAATATGGTGAGATTCGAAGAAGTCAGAGATACATCCCTGACTGTGATTTTGGGTTCTGAAAATCCTTCTGAAGAAAATATCGGTGGCTATGCCCTTTGGCATCGGAAGGCTCAAGATGATGAATATCCAGTTGAACCAACTTGTACTTTGGTTCTACCTGACAGGAGTTTCAATGTGAGGGGTCTAATTCCAGCTGCAAAGTATAGTTTCAAAGTTATTTCATATAATGGCACAAGGGAGATGGGTATGTGTGAAGTTCAAATGTCAACAAAGCCTGGCGAGTATGAAGTTCCCAACTGTTCAGCAACAGAAAGAAGTCAGAGCCCTGTAACCAACTGCAGCAGTCATTCCAATCCTTCTTCAGTGGAAGATGAAACTAATAACAGTAATCCATTTAGTGATCAGACCAATGATCGGGCAGATAATTATCTTACTTATCACAAGGATGCAGACAAGCTTGCTTCTGACAATTTATCCAATGGTGTTATTAAATGTCCCAACACCGTCGGAGGTGGACCACCGGCAGTTGCAGATTCTTTGTCAGAAAAGCAACGTGCTAGAGACTTGGCTGTAAACATACCTGGTTCTGAAATTCTAAAGCTTGAAAACAACCAATCACCAGAGGAACAAATCACTGAGGACTTGAGCACTGAAGATGGGTTAAATTCACCTGTTCAGACTGGGAGGGAATGTGTCCCACTGTTGCGTTGCTCAGAAGCAAGCTTACCTATTACTCCTTGCAAGTTGGAAATACTTAAGGACGGTCCAGGAAGAAGTGGGAGATCTAAATCCATGGGTAAGGATAAGGAGAATGGTTCTGGGAAGAGAGATAGCCCTCAAGATGGAAGCACATCTAAGAAGAGAGCCGAACAAAGGCCAGATGAAGGCTGCGTTGGCAACGGGTATTCAGATCGGGATTTCGAGTTTTATGTGAAAGTAATCAGATGGCTTGAGTGCGAAGGACACATAGAAAAGAACTTCAGACAGAAATTTTTGACTTGGTACAGCTTGAGAGCAACATCACAGGAACTGAAGATTGTGAAAGTGTATATCGATACATTTCTTGAAGATCCGGCTTCTCTTGCAGAGCAGCTTGTGGACACATTCTCAGAATGCATATCAAACAAGAGACCATCCGCTGTGCCAGCTGGGTTCTGCATGAAGCTCTGGCATTGA 2223 0.4233 MATADSSLEGLTLDPAKCSKLSMEEKRELVYEISKWPNDALEMLQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSGGQDTATEAEPHSSTSNGQKPAKRQRKNENPSRLPLSLNDFPVNNGVGDANSISYCKNTACKATLSEADVFCKRCSCCICHKYDDNKDPSLWLICGSEPPFVGVSCGLSCHLECALKHDNSGIGKDGKRPKLDGSFYCISCGKVNDLLGCWRKQLTVAKDTRRVDILCYRVSLSQRIFQGTEKYKKIYELVNEAVRKLEPELGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSLLSKRVRSPSPDPTIQDANLIASNMVRFEEVRDTSLTVILGSENPSEENIGGYALWHRKAQDDEYPVEPTCTLVLPDRSFNVRGLIPAAKYSFKVISYNGTREMGMCEVQMSTKPGEYEVPNCSATERSQSPVTNCSSHSNPSSVEDETNNSNPFSDQTNDRADNYLTYHKDADKLASDNLSNGVIKCPNTVGGGPPAVADSLSEKQRARDLAVNIPGSEILKLENNQSPEEQITEDLSTEDGLNSPVQTGRECVPLLRCSEASLPITPCKLEILKDGPGRSGRSKSMGKDKENGSGKRDSPQDGSTSKKRAEQRPDEGCVGNGYSDRDFEFYVKVIRWLECEGHIEKNFRQKFLTWYSLRATSQELKIVKVYIDTFLEDPASLAEQLVDTFSECISNKRPSAVPAGFCMKLWH 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1456 740 MobiDBLite consensus disorder prediction 446 488 - -
Mibi04g1456 740 MobiDBLite consensus disorder prediction 602 646 - -
Mibi04g1456 740 MobiDBLite consensus disorder prediction 603 643 - -
Mibi04g1456 740 CDD FN3 352 426 IPR003961 GO:0005515
Mibi04g1456 740 MobiDBLite consensus disorder prediction 87 108 - -
Mibi04g1456 740 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 740 IPR044514 GO:0010048|GO:0040029
Mibi04g1456 740 Pfam PHD - plant homeodomain finger protein 143 262 IPR032881 -
Mibi04g1456 740 MobiDBLite consensus disorder prediction 551 573 - -
Mibi04g1456 740 SUPERFAMILY Fibronectin type III 353 427 IPR036116 GO:0005515
Mibi04g1456 740 MobiDBLite consensus disorder prediction 87 127 - -
Mibi04g1456 740 CDD PHD_VIN3_plant 163 228 - -
Mibi04g1456 740 Gene3D Immunoglobulins 348 444 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1456 Mibi-ChrMibi04 39602651 39607764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1456 5 607 PHD Gene Family AT4G30200 47.516 1.81e-166 492