Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1455 ATGAATCCCACCCAGTTCGACGGCGCCGCTGCCTTCTCCGGCGGTGGTTTTATGCCTTCTCAGGCTACTCAAACCCATGACTCTTCCTTCTCCTTCTCCAAGAATCGTGATTCTCAGTCATTGCTTCCTTTGACGGTCAAGCAGATAAAGGATGCGTTTCAGTCAAGTGATGATAAGTCTAATATGATTATTGATGGCGTGGATGTTAATAATGTCACTCTTGTAGGAAGGGTTTCCAACAAAACTGGAAGGGTTACTGATGTTACTTTTGTGCTAGATGATGGGACTGGAAGGATTGAGTGTAGTAAATGGCTCCAGGAAGATGTAGACACCAATGAAGCGGAGGGTATCAGGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGACCTTAAATGTATTCTCTTTTAGGCCTTTGAACGACTTTAACGAGATTGCAAGTCACTTCATTGACTGTATATACGTCCATCTCTATAATACCAGGATACGGACCAGTGTGCCGAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACAAGAGGTTATCAAGCTGCCCCTCCAAGTCAAGTGAGAGGACTATTTGTGAATGTTAAATTCTCTGGTCAGCACAACAATGGTCAGAAGAGTGTTGAACATAAGGTCTTAGAAATCTTGCATCTTCCCTCGAACAGGGAAAAAGAGGAGGGTATCTCTGGGGATCTTATTGCACAGCATCTTGGAATTTCTTTGGACAAGCTCATGTTATCCATAAAATATCTCATTCAGGAAGGCCTCATTTATGAAGCTATATCTGATCATTACAAGTCAATTGCCAATGGTTGA 849 0.424 MNPTQFDGAAAFSGGGFMPSQATQTHDSSFSFSKNRDSQSLLPLTVKQIKDAFQSSDDKSNMIIDGVDVNNVTLVGRVSNKTGRVTDVTFVLDDGTGRIECSKWLQEDVDTNEAEGIRDGMYVRLHGHLKGFQGKRTLNVFSFRPLNDFNEIASHFIDCIYVHLYNTRIRTSVPNQQSMNNSLPINPTRGYQAAPPSQVRGLFVNVKFSGQHNNGQKSVEHKVLEILHLPSNREKEEGISGDLIAQHLGISLDKLMLSIKYLIQEGLIYEAISDHYKSIANG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1455 282 MobiDBLite consensus disorder prediction 17 35 - -
Mibi04g1455 282 SUPERFAMILY Nucleic acid-binding proteins 41 168 IPR012340 -
Mibi04g1455 282 SUPERFAMILY "Winged helix" DNA-binding domain 215 279 IPR036390 -
Mibi04g1455 282 FunFam replication protein A 32 kDa subunit A-like 34 168 - -
Mibi04g1455 282 Gene3D - 33 168 IPR012340 -
Mibi04g1455 282 PANTHER REPLICATION PROTEIN A-RELATED 5 280 IPR040260 -
Mibi04g1455 282 Pfam OB-fold nucleic acid binding domain 72 144 IPR004365 GO:0003676
Mibi04g1455 282 Gene3D - 211 281 IPR036388 -
Mibi04g1455 282 PIRSF RPA32 2 280 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mibi04g1455 282 MobiDBLite consensus disorder prediction 11 35 - -
Mibi04g1455 282 Pfam Replication protein A C terminal 163 274 IPR014892 -
Mibi04g1455 282 CDD RPA2_DBD_D 71 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1455 Mibi-ChrMibi04 39567820 39572108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1455 6 230 Core DNA Replication Machinery Family AT3G02920 49.356 2.44e-73 223