Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1419 ATGATCCCTTATAATGATCCTCCCTCCGAATCAATTCCACAATGCATAATTGAAGATGATCCTTCCTTTACGGATCTCATGAACAATGGCTTCTTCTTCACCAGTAACCCTACTTCACCGGACCACGGTACTAGTAGCTCCACTAGCACATTGTTTTCGGGCGAGAAACCATGTGCTGATGATGATAATAGAGTAAATAATGATGGAGGATGTGTGGCGCGTGAAGTGAACGCGCCACCAAGATCGAGGAATTACCGAGGCGTGAGGCGGAGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGAAGAGGAAAGGTTTAAGGACATGGTTGGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCCTATGATAGGGCTGCTTTTGAGATGCATGGTAGAACAGCAAAGCTCAATTTTCCACACCTTATCGGATCGGAACAACGGTCGCCGGAGCCGCCTAAAGTGGTGGCCGGAGAGAAGCGGAGCGGCTCGCCGGAGTATTCGTTACCGTCAACTAGTACATCTGAGGATGATGGATGTCAAGGGTTGTCAAGGAAGAAGAAGAGTTTGACTGGTCTATTGAATAAGTTAGCAACAAATAGAAGCCATGTTAGATTGGGTTGA 630 0.4889 MIPYNDPPSESIPQCIIEDDPSFTDLMNNGFFFTSNPTSPDHGTSSSTSTLFSGEKPCADDDNRVNNDGGCVAREVNAPPRSRNYRGVRRRPWGKFAAEIRDPKRKGLRTWLGTYEREEDAALAYDRAAFEMHGRTAKLNFPHLIGSEQRSPEPPKVVAGEKRSGSPEYSLPSTSTSEDDGCQGLSRKKKSLTGLLNKLATNRSHVRLG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1419 209 FunFam Ethylene-responsive transcription factor 2 83 143 - -
Mibi04g1419 209 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Mibi04g1419 209 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Mibi04g1419 209 SUPERFAMILY DNA-binding domain 84 143 IPR016177 GO:0003677
Mibi04g1419 209 CDD AP2 84 144 IPR001471 GO:0003700|GO:0006355
Mibi04g1419 209 MobiDBLite consensus disorder prediction 167 181 - -
Mibi04g1419 209 Gene3D AP2/ERF domain 83 143 IPR036955 GO:0003700|GO:0006355
Mibi04g1419 209 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Mibi04g1419 209 MobiDBLite consensus disorder prediction 142 187 - -
Mibi04g1419 209 MobiDBLite consensus disorder prediction 35 54 - -
Mibi04g1419 209 MobiDBLite consensus disorder prediction 35 86 - -
Mibi04g1419 209 PANTHER DNA-BINDING DOMAIN 62 175 IPR044808 GO:0003700|GO:0009873
Mibi04g1419 209 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Mibi04g1419 209 PRINTS Ethylene responsive element binding protein signature 124 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1419 Mibi-ChrMibi04 38508254 38508883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1419 84 185 AP2-EREBP Transcription Factor Family AT2G44840 59.633 9.34e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g1419 AP2 1.5e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g1419 04 38508254 38508883 Mibi04g1419 04 38508254 38508883 ECH