Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1415 ATGTTCAAATTCAATTTTCTCTCACCTCATCATCATCATCATGATGATGATCCTGAAAATTCTTGCAATTTAGAAGCAATCAGCCAGCATCTTCTAGGCAACGAAATGATGACCGACAACATTTGCATCAATGATAACAATATCCAGATAGAAGATGCTGCGGTGGCGGCGCGTGATGGCGAGTGTAACGCTGTCGTGGCGCCACCTGTCGATCATCGGCAACACTACCGGGGTGTTAGGCGGCGGCCATGGGGGAAATACGCGGCGGAGATTAGGGATCCGGCGAAAAGTGGTGCTAGGGTTTGGCTTGGGACTTATGATACGGCGGAGGATGCAGCTATAGCTTATGATAGAGCAGCTTATGAGATGCGTGGAGCTAAAGCAAAGCTTAATTTTCCTCACCTTGTGGGGACCAATGTGTGGGACTCGGTTCCGGCTAGCCGGAAGCGGTGCAACCTCGCCGTGGCCGGCCACGGTGGTGGCGGAGAGAAGTGTTCTTCAATGCTTAAGCGGATAAGGAAGAGTGAGTCCTGA 534 0.5112 MFKFNFLSPHHHHHDDDPENSCNLEAISQHLLGNEMMTDNICINDNNIQIEDAAVAARDGECNAVVAPPVDHRQHYRGVRRRPWGKYAAEIRDPAKSGARVWLGTYDTAEDAAIAYDRAAYEMRGAKAKLNFPHLVGTNVWDSVPASRKRCNLAVAGHGGGGEKCSSMLKRIRKSES 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1415 177 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mibi04g1415 177 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Mibi04g1415 177 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Mibi04g1415 177 CDD AP2 74 135 IPR001471 GO:0003700|GO:0006355
Mibi04g1415 177 PANTHER DNA-BINDING DOMAIN 62 145 IPR044808 GO:0003700|GO:0009873
Mibi04g1415 177 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Mibi04g1415 177 Gene3D AP2/ERF domain 74 135 IPR036955 GO:0003700|GO:0006355
Mibi04g1415 177 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Mibi04g1415 177 FunFam Ethylene-responsive transcription factor 2 74 134 - -
Mibi04g1415 177 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1415 Mibi-ChrMibi04 38260046 38260579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1415 75 144 AP2-EREBP Transcription Factor Family AT2G44840 74.286 1.23e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g1415 AP2 1.3e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g1415 04 38260046 38260579 Mibi04g1415 04 38260046 38260579 ECH