Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1411 ATGTGTGTCAGAGTTGGAAAGGGAAGGTGTCATATTCATGTCATGGATGCACATTTTGCTGTGCCACTCATTTTCACTTTTGTTTTGCTCAATCATATTCATGGGGCGCGTCAAGTCATTCCTCAACATCGCGTGGATCCACGCGCCTTCTCCCTCACCTCCTGCGTTTTGGGGGTGTTTGACATTTTGTTCTGCTTCATCATGGTTGTGTTTGATATTTTCTCAGTTTTTAGACGTGTGATTTGGGCCATGGAGAGGGTTTCAGAGCCAAAGACACTTCCTCGATCTTTGCCTGTTCTAGTTGAGGTATCAAATCCACACATAAGTACAGCAAGGAGAGATGGTCAATTGCCAAATTCACAGGATATGTCAAGTATGCGTGGGATTTCAGTAAGAGAAGTCCATCAGTTGTCAAAAACACAGGATAGACCAATCACACGGCTAGCCTCCATCAGAGAAGTGGCTCAGCTATCGAATGCCAGGCTAGTTTTGATTAGAGATGATATAGGATTTGATGGACAAGGCTCTCATGAGCCTGTTCACTTTGCACCTGCAAGAACATGGAAAGGAAAGGCATCTTTACCAGAATCAGAAGAAATTATAGCTGATGTCGATGCATTAAAGGGGAGCTTTGATTTATTTGAGGAAGGAGGCCCGAGTTCATTTGCTGGTGCTAGTCATCCCCCTGAACCTGTTGATATGGATCTCATGAGAACGGTTTATGTTCCAATAGGTCAAAACAAATCCGAGGCTGGCGGCTTAATGAAGAGCTTTTCTGTGAAGGGTTCCTCCCTAGACGATCTTTCAATCCGTATTCCGCCTAAAAAACCAAACCCAGCTGTACTTTCCCCTGCAGAAAGTCTAATTGAAGAGCAAGGTGATGCAAGGAACCTGCCCTCTCCAGTTTTGGGTCCTCGAACATCACAGAATACTGATCACTCTTTCCTTCCTCCAGATTCTGATGAGAAAGAATGTGTTTGGGATGCATCTCTGCCTCCAAGTGGAAATGTCAGTCCACTTAGTAGTATTGATAGTACTGGTGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCAAGTACATACCGGAGTGATGGACTCACTAGTGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGTACTAAGGGCAGTGTCCGGGGTGATTCTCTAGAGAGTACGAAAACTAGTGCTAGTCAAGCAAGTGATAGCAGTGGGTTTAGTGATGACAGCAACTGGAGCAATGTTACTGGTAGCGCCAATAAACCTCACAAAGGAAATGATCCTCGCTGGAAGGCTATCCTCGCCATCCGAGCTCGGGATGGAATTTTGGGCATGAGTCATTTTAAGCTTCTCAAAAGACTTGGTTGTGGTGATATCGGAAGTGTATATCTCTCGGAGTTGAGTGCAACTCGGTGTTATTTCGCGATGAAAGTTATGGACAAGGCATCATTAGCAGCTAGAAAGAAGTTGCCTAGGGCACAAACCGAAAGGGAGATATTGCAGCTGCTTGACCATCCATTTCTGCCAACTTTGTATACTCATTTTGAGACAGACAGGTTTTCCTGTCTGGTGATGGAATACTGTCCTGGAGGTGACTTGCACACATTAAGGCAACGTCAACCTGGAAAACATTTCTCAGAGTATGCTGCTCGTTTTTACGCTGCGGAGGTTCTCTTAGCACTTGAATATTTGCACATGCTTGGAGTAGTGTATCGGGACCTTAAACCTGAAAATGTGCTAGTTCGAGATGATGGCCACATTATGCTTTCGGACTTTGATCTCTCCCTAAGATGTGCTGTTTCACCAACATTGATTAGAACATCTGATGGTGACCCCAAACGAGGTGGCGGGGCATTTTGTGTTCAGCCTGCTTGTACTGAGCCTTCATCGGTATGCATCCAACCTGCCTGTTTCATCCCTCGGCTCTTCCCTCAAAAAAACAAGAAATCGCAGAAGCCTAAAGCTGATCCAGGGTTATCAGCCAACACGCTTCCTGAGCTTGTTGCTGAGCCCACTTCGGCTCGGTCCATGTCCTTTGTTGGAACCCACGAATACCTCGCTCCTGAAATCATCAAAGGAGAAGGTCATGGTAGCGCAGTGGATTGGTGGACATTTGGTATTTTCCTGCACGAGCTCTTATATGGTAAAACACCTTTCAAAGGATCAGGGAATCGTGCTACATTGTTCAATGTGGTTGGCCAGCAGCTTAAATTCCCAGAGTCACCGGCCACTAGCTATGCTAGCCGGGATCTGATCCGAGGCTTGCTGGTCAAGGAACCACAGAACCGTCTTGGAGTGAAGAGAGGTGCAACTGAGATCAAGCAGCATCCCTTCTTTGAGGGTGTGAATTGGGCTTTGATCAGGTGCAGCACGCCCCCAGAAGTGCCCAGACCAATCGAGAGTGAGATGCCCGGGGCTGCAAGATTTGGACCGCCGGATCCAGTTGGCAACAATAGCAAGAGGATGGTAGGTACTGATGTGAAGTCTGGTGGGGGTAAATATCTAGACTTTGAGTTCTTCTAG 2526 0.4632 MCVRVGKGRCHIHVMDAHFAVPLIFTFVLLNHIHGARQVIPQHRVDPRAFSLTSCVLGVFDILFCFIMVVFDIFSVFRRVIWAMERVSEPKTLPRSLPVLVEVSNPHISTARRDGQLPNSQDMSSMRGISVREVHQLSKTQDRPITRLASIREVAQLSNARLVLIRDDIGFDGQGSHEPVHFAPARTWKGKASLPESEEIIADVDALKGSFDLFEEGGPSSFAGASHPPEPVDMDLMRTVYVPIGQNKSEAGGLMKSFSVKGSSLDDLSIRIPPKKPNPAVLSPAESLIEEQGDARNLPSPVLGPRTSQNTDHSFLPPDSDEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIANSCASTYRSDGLTSDGMLSLDRNFDSTKGSVRGDSLESTKTSASQASDSSGFSDDSNWSNVTGSANKPHKGNDPRWKAILAIRARDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLPRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSDGDPKRGGGAFCVQPACTEPSSVCIQPACFIPRLFPQKNKKSQKPKADPGLSANTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPIESEMPGAARFGPPDPVGNNSKRMVGTDVKSGGGKYLDFEFF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1411 841 FunFam Serine/threonine-protein kinase D6PK-like 447 532 - -
Mibi04g1411 841 SMART serkin_6 449 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1411 841 MobiDBLite consensus disorder prediction 382 426 - -
Mibi04g1411 841 Gene3D Transferase(Phosphotransferase) domain 1 674 798 - -
Mibi04g1411 841 CDD STKc_phototropin_like 447 799 - -
Mibi04g1411 841 PANTHER FLIPPASE KINASE 1-RELATED 227 802 - -
Mibi04g1411 841 MobiDBLite consensus disorder prediction 286 341 - -
Mibi04g1411 841 FunFam serine/threonine-protein kinase D6PK-like 533 600 - -
Mibi04g1411 841 SUPERFAMILY Protein kinase-like (PK-like) 431 805 IPR011009 -
Mibi04g1411 841 Pfam Protein kinase domain 450 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1411 841 Pfam Protein kinase domain 677 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1411 841 MobiDBLite consensus disorder prediction 804 825 - -
Mibi04g1411 841 FunFam serine/threonine-protein kinase D6PK-like 675 798 - -
Mibi04g1411 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Mibi04g1411 841 MobiDBLite consensus disorder prediction 382 422 - -
Mibi04g1411 841 Gene3D Transferase(Phosphotransferase) domain 1 533 602 - -
Mibi04g1411 841 ProSiteProfiles Protein kinase domain profile. 449 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1411 841 Gene3D Phosphorylase Kinase; domain 1 447 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1411 Mibi-ChrMibi04 38201474 38207504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1411 84 841 AGC Kinase Gene Family AT2G44830 66.921 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi04g1411 Pkinase 4.7e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g1411 04 38201474 38207504 Mibi04g1411 04 38201474 38207504 ECH