Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1358 ATGAAAGCAGTATTAGTAATGGGGCTTGCCATCTTAAGCCTTATCTCACTGGCATCTGCTACTCCTGGAACTGCCACCTATTACACTGTATATAAGCCATCGGCATGCTATGGATTTCAAGATCAAGGGACTATGATAGCAGCAGCAAGTGACCCAATCTATAACAATGGAGCTGCATGTGGAAGAAGGTACAGAGTGAGGTGCACCAGCGGCACCAACAGTGTTCCTAAAGCGTGCCGTGGAGGAAGTGTCATCGTCAAGGTCGTTGATCGCTGCCCTTCACCGGGATGCCGAGCAACCTTGGATCTCTCTCGTGAAGCTTTCTCTGTTATTGCTAACCCTGATGCAGGAAAAGTCAACATTGACTATGTGCGGTACGTTATTCTTTTTGTCTAG 396 0.4747 MKAVLVMGLAILSLISLASATPGTATYYTVYKPSACYGFQDQGTMIAAASDPIYNNGAACGRRYRVRCTSGTNSVPKACRGGSVIVKVVDRCPSPGCRATLDLSREAFSVIANPDAGKVNIDYVRYVILFV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1358 131 SMART dpbb_1 46 123 IPR007112 -
Mibi04g1358 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 2 124 IPR044206 GO:0009627|GO:0048046
Mibi04g1358 131 FunFam Barwin-related endoglucanase 20 125 - -
Mibi04g1358 131 Gene3D - 13 127 IPR036908 -
Mibi04g1358 131 Pfam Lytic transglycolase 47 123 IPR009009 -
Mibi04g1358 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 22 125 IPR007112 -
Mibi04g1358 131 SUPERFAMILY Barwin-like endoglucanases 11 124 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1358 Mibi-ChrMibi04 36088817 36091956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1358 45 130 Expansin Gene Family AT2G45110 30.208 9.06e-08 47.4