Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1333 ATGTATTGCTTTCACTACTTCACTAGACTTGGGAGGCGAAGGTCATCATTAGAATCTGAGCTTGAACAAGAATTGAAGTCCCAAATCTCTGATGAGGTGAATAGAGTTAAGAAATCTTCGTCCTCACCATCAATCTTATCGCGTGGGATTCCAGAATTGTATGAAGAGAAGGCTCACAATTTGCGTGTTTTCTCCTTCGCTGAACTCCAGAGAGCGACGAGTAATTTCAGTAGGGTTTTGAAGATTGGTGAAGGAGGGTTTGGGAGTGTATTTAAAGGTTCAATCCAGGATTCTGATGAGAATAAGAAGGATCTTATTTCTGTTGCTATCAAAAGGCTTGATCCTGATGGATTCCAGGGTCATAAGGAATGGTTAGCTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTTGTGAAACTCATTGGATATTGCGCTGTGGATACTGAAAGAGGGATCCAGAGACTGCTTGTATATGAATTCATGCCGAATAAAAGCTTGGAATATCATCTTTTTAACACGGCATATGATCCTCTTCCTTGGAAAACAAGACTCGAAATAGCACTTGGAGCAGCTCGAGGGTTAGCTTATCTCCATGAAGAATTAGAAGTTCAGGTGATATATAGAGATTTCAAAACCTCAAATGTATTACTGGACGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGGCCGATAGCTGGGCATACTCATGTTTCAACTGCAGTGATGGGGACATTTGGTTATGCTGCTCCAGATTACATTGAGACAGGCCATCTCACTACAAAGAGTGATGTATGGAGTTTTGGTGTGGTTCTCTATGAAATTCTTACAGGGAGGAGATCACTGGATCGAAACCGGCCGAAAATGGAGGAGAAACTCCTGGAGTGGGTGAAACAGCACCCTACTAACAAAAGTAGTTTCAGCTTGATAATTGATCCAAGACTTGAAGGCCAGTATCCCATAGACGAAGCGCGAGATTTCGCCAAGCTTGCGGATGATTGTCTGCGTAAGAGTGCAAAAGAGCGACCGAGGATGAGTCAGGTTGTTGAGAGACTGAAGCAGTTAATCATAAATTTAGAGGAGGCTAATCCTGATGTGAAAAACATTAGCCTGCTTGAAAATGGTGATTTGCTTGATCATGAAGAAAAGCAAAATCAACCAAACCCTTCAAAGTTGTGGCAAAGGAGGATGAACCATCTTGCAAAACCTGGTGAGCATGTGGAGACTGCAATAGGACGAAGATTTATGATCCTACAAAAGACCAATTCTGGTTCTTAG 1296 0.4213 MYCFHYFTRLGRRRSSLESELEQELKSQISDEVNRVKKSSSSPSILSRGIPELYEEKAHNLRVFSFAELQRATSNFSRVLKIGEGGFGSVFKGSIQDSDENKKDLISVAIKRLDPDGFQGHKEWLAEVQFLGVVEHPNLVKLIGYCAVDTERGIQRLLVYEFMPNKSLEYHLFNTAYDPLPWKTRLEIALGAARGLAYLHEELEVQVIYRDFKTSNVLLDENFRPKLSDFGLAREGPIAGHTHVSTAVMGTFGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLDRNRPKMEEKLLEWVKQHPTNKSSFSLIIDPRLEGQYPIDEARDFAKLADDCLRKSAKERPRMSQVVERLKQLIINLEEANPDVKNISLLENGDLLDHEEKQNQPNPSKLWQRRMNHLAKPGEHVETAIGRRFMILQKTNSGS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1333 431 FunFam PTI1-like tyrosine-protein kinase 3 163 372 - -
Mibi04g1333 431 ProSiteProfiles Protein kinase domain profile. 76 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1333 431 Gene3D Phosphorylase Kinase; domain 1 50 162 - -
Mibi04g1333 431 ProSitePatterns Protein kinases ATP-binding region signature. 82 111 IPR017441 GO:0005524
Mibi04g1333 431 PANTHER OS01G0588500 PROTEIN-RELATED 38 361 - -
Mibi04g1333 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mibi04g1333 431 SUPERFAMILY Protein kinase-like (PK-like) 58 359 IPR011009 -
Mibi04g1333 431 FunFam Serine/threonine-protein kinase BIK1 43 162 - -
Mibi04g1333 431 Pfam Protein tyrosine and serine/threonine kinase 81 358 IPR001245 GO:0004672|GO:0006468
Mibi04g1333 431 CDD STKc_IRAK 82 361 - -
Mibi04g1333 431 Gene3D Transferase(Phosphotransferase) domain 1 163 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1333 Mibi-ChrMibi04 34588440 34593181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1333 62 358 Glycoside Hydrolase AT3G07070 50.836 1.33e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi04g1333 PK_Tyr_Ser-Thr 2.4e-45 CL0016